Gene detail

Detailed information of ctg251-4.3-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg251-4.3-1	TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 6 TMCO6	chr3	92882674	92905481	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg251-4.3-1

ATGCTACATAAGTGCATCTATACAAGAGAAATTCGTAAAGAGAAGAGAGAGCGAGTGGTGCGATCAAAGCGATTTCGTCACAGTGTGTGTGAGGACGAGAGTGAAACAGAATTCACTAAAGAACAGATTGAAAATGCTGCAAAAGCCATACAGAAGAAAGGAAAAGAAGCTCTTGAATCTTTCCAACTTCTCAGGCGGGCATTTGCTGCCGGTTCCACATACATTGATATGTTTCTAAGTGTCGACAATGCATTACAGACTTTGGTCGGACAACTGACGGGTAAAGACACAGATCTGCAGTTGGCTGCTGCATGGTGTTTGACTAACATATCTGCGGGAACTCACGAACATGCCATGGTGGTTGTCAAGTTAGCAGCTCCTTACCTGACCACCTACCTGGATAGCGGCAGTAATATCCTGAAGGATCAGTGTGCATATGCGATTGGCAACTTGGCTGGGGACAGTCAGGAGTGTCGTGAAATCCTTCATTCTCAGGGTTGTGTCCCTTTGCTGGTCAAACTTCTTGAGTCATCTGCTCTAGAGGTGGCCCAGTATGCAGCATTTGCTCTGTCCAACATATCAAGGGAAAGCACAGACATTACAAGGTTGGCTGCTGTTACTCTTGATGTGTGTGTTACAAAGTTGGCTGCTGTTACTCTTGATGTGTGTGTTACAAGAGACATGGTTAAATGTGGCGTGGTGCCCATCATTTTAAAGAAGATTAAAGAAGTCCCTCTCGACAAACCGGAGCTCTTAGCAGAGACTGCATGGTTGTTAACCTATCTCACTGCAAGTGGTGACTATACAGAGGAGCTGATAGCGGGCGGTGTTCTCAGTCGAGTGGTAGAAATCCTTACCAAGTTTGCGGACCACCCACCGGAGGATCCACAGGTGATGACTCCTCTGCTGCGGACGCTGGGTAACATCAGCAGTGGGCCCGACGAGTACAGCATGCAGGCGTGTGAAAACCCATTCCTCCTCCATGCCCTCGAGAACTTCCTCATGTCCTCCCACAGACACATCATCAAGGAGACTCTCTGGGTCCTGTCCAACATGACGGGTGAAATCAGTGTGTGTAGCTCAGTGGCATTTGGTCCCTTGCTGCCCATCATTATCAAACATCTCGACGATGCCTATGACATAAAGACAGAGGCTGCATATTTGTTATGTAACATGGGTTGCCATGGTACGGAGGTGTGCACCAAGTTGGTTGCCGAGAAAGCCATACAACACATCATCCCCATGCTGAAATCACAAGATATTGAGATGATCCACCTCGCGTTGTCCTTCTGTGAAATGGCTCTTCGGCTTACGGAAAGTGCAAAGTTCAACTTTGAGTCGAGTGATGGGGTGGGTCGTCTGGAGGGTTTGGAATATCACTCGAACGAGATGATCCGCAAAGAGGCTCACCAGCTGCTAGACACATACTTCCTCATCGACGAAGAGAAGGGCTTGTAATGAGAAGACTCATCAAAAACCATCTGACTGGACTATACCACTACTCGGCCATCTAAACATTTCATCAAAAAACCATCTGGACAATATCAGTACATAATTAGTGCTTCTCAGAAATAATCTAAACATCTCAATAAAACAATCTGACTGGACAATAGCACTACATAATTAGTGCTTCTCAGACTTGTCTAAACATCAGAAACCATCTGGACAATATCAGTACATAATTAGTGCTTCTCAAAATTAAATTAAACATCTCAACAAAACCATCTGGACAATCTCAGTACATAATTAGTGCTTCTCAGACTGATCTAATCATCAAAAACCATCTGGACAATCTTAGTACATAATTAATACTACTCCGACTTCTCTAATCATCAAAAACCATGTGGATAATAGCACATGTGAGTTAATTCTACTCAGTCATCTGCAGATGCACCTGTTGTCTTTAGCCTTGTGGGCTATTTCACTTGTTATTGACAAACTTGGTATTGAAGTATTTGAATCGTCCTCATTATGGATTAACCCTTTTTTGGGGCAGTTTAACATCATCTGGTCCAGTCACTGAATTTACAGGAAACTTGTGTGAATATTTTCATTCAAATGCAAATCATGTTTTTTACTGAACCATAAAGTTGTTTTTTCATTGGCATATAAACCATAACTGTAAACCATTTTTGTATTTTTATTTTATGTTTTTATTAGATTGAAAAAAAAATTCATATGCATATAACCTATTTTGGTAGTTTATCAAACATTGCATTGTGACCATGTTTCAACATATTCCATTATTTCTGTTGTGATCAAATTATATGTTATAAATAGTTGTACTTTGATTACATTTTAATTTAAAAGTGTTCCACATTATTTCTTTGTAATTATTGATGTTTTTATTGTTGCTTCATGTCCAGATAGTGTTTCGCTGGTGGGCCAGTAGCCAACTATAAATGGATTCATTGTTGGCCTGGCAGCTCACATTTGCCAACTGGGCCA

Transcript

ctg251-4.3-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00514	Arm	Armadillo/beta-catenin-like repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000225	Repeat	Armadillo	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR024931	Family	Importin subunit alpha	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16356	TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 6 TMCO6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0061608	Molecular Function	nuclear import signal receptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg251-4.3-1 global RNA-seq network