Gene detail

Detailed information of ctg233-7.1-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg233-7.1-1	MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G	chr4	94917323	94946304	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg233-7.1-1

TAACTCCTTGTATATCATCATTATTGATGTTAATTTATGTTTATTTTCAGCCAACTGAACGTTTTCTTTAATATTGTTAATATTTTAATACTTTCAGCCAATGGAAAAAGGTCCAAGGCTTCAGAGACCACACCACCTCAGTAACATGGCCACAGCTTTGCTGTTTTTGGAAAAGAAGAAGATCAAAATGGTGAACATCAACGCAGCAGACATCTGTGATGGCAAACCGTCCATTGTTCTGGGTCTCATCTGGACCATTATCCTGTACTTCCAAATTGAAGAGACAATCTCAAATGTTCCGAATGTGCCAGACATGGAAGGGGAAGGCCCGTCAAACAAGAAAAAACAAGCCTTGCCCAAACAGAGTCTGCTAGCCTGGGCAGGCAATGTGCTAATGAAGAAATATGGAATTAAAGTGAAAGACTTTGCAAAGAGTTGGCGAGATGGTGTGGCATTCAATGCCATGATTCACAATATTCGTCCTGACCTTGTTGACATGGATATCATCCGCAAGCAGACGGCAAAAATCAACCTCGAACATGCTTTTTCCACTGCAGAGGATCACTTGGGAATTGCCAGACTGCTTGATCCAGAAGATGTTGACGTGGAGAAGCCTGATGACAAATCTATCATGACGTACGTCGCTCAGTTCCTCAAGGCGTACCCAGACTCGGGAGACCCCAACTACCGAGGGGTGCCCAGTACGAACATAGACACTGCTGACAAGGAGATGCAAGCCTTCACAACGTTGATGAACTGGCTCACATCAGACGCAGATGAAATCCTGCAGGGTGCTGAAGAACCAGTCCAAGACAGACAGGCTGAGTTCTTAGAATACATTGGCTTCCAAACAGAACTTGACAGAAGAGAACCCATCTATGTTAAAATAGGTGAAAAAGTGTTATCAGGGAAGGCACTGAAGCTGAAGGCGACAGACTGGGAGAAACTGAACGATAAATGGATGAACGTGGTCGGTCGCACGCAGCTCTGGCTGCTCAAGTTGGATCGCAGTCTTCCTGGCCGGCTGGGACAGTTCGGAGAGTGGCTGTACCGAGCCGAGCGCATGCTGGAGGAGAATGTGGAGATGTTAGAGAACCCAGAGGACATGGCAAATCAGCTCCAGGCCTTTGTTAAGAGACATAAGGAATTCTTTGATGACCTGGAATCAAACAAACAGTTCTTCCTTCAAGTGAAACGAGCAGGACGTTACGAGGGGGAGTTCCTCCACCCTCCTCATCTGGACATGATGTCAAAGAGACTTGAAAAAGTCAGCAAGTTGTCTTCTGCCAGACAAAAGCAGTTTGAATTTGAGGAGATGAAGTATCGACTCATCTCCTTCCTGGTGGTCAGTGAGATGAAACTCCAGCTGTGGACAGAAAAGTATGGCAGTCATGAGAGCGTGGAGCTGCTGCTCAAGGATTACCAGGACTTTGTTGTGACTGGTCAGCTTTTTGAAACCTATGATAAAACATACACAGCCTGCAGGAAGAAAGCTGATGCCTTCAAGAAAGATGGAGCAGGCCCAGACGACATAAAAGAGATGGACCACCTGTTTGACGATATCACACAGCGGTGGAAGAAGGTGTCTGTGGAGATCCGGTCTCTCCGGTCGATGCTGGAGGAGGTGTTGGAGACGTGGAAGCGGTACAGTGCCTGTGTTGATGTCCTCACCGTGTGGGTCACTGAGGGCGAACAAGTCATGAAGCTTTCTGCAGATGAAAAACAGGAATTTTTCCAAGACATTGCTCAGTATGAAGAGAAGCACCGAATTCTGAATGAAGCCGCTAACTTCCTGATTGAGTTGTCTTGTGATCCTACAGCTAATGAGATCAGAAAGACCGTCCTGATGTTGAACCGACGTTTCCAGGACCTGAGTGAAGGATTCCAAACCTTCCGACAGACGGAGGTGATAGGCCGGGCTATGGCGCAGTACAACGAGGGTGCCCAGCAGCTGCAGGCCTGGCTCACTAATGCAGACTCCAATGTCACTGATCAGATCCCTTGTGTCCATGCTGCTCTCAGAGAGTACCTGCAGCAACTCGATTTGCTGAATACACAAATGCCAGAGATAGAAAGCAACTTCAAGATCACAACAAAAACAGCCCAGTCTCTAGTCAAAGATAGCTCACAAGAAGAAGTCAATGAGATGTTACAGACTTTGAATAGACACAAAGAAGTCATTGTCAGGCTAAGGAAAGATATTCCTGAAAAAATAAAAACAATTAATTCCATCTTGCCAAATGTAGAGTCTCTAGAAACAGGAATATCAGATTTGAATGAATGGCTGACTGAAGGAGAAAGCTTGTTACAGACACACCGATTGGATGGTTCTGCTGAAGCAACTGAAGCTAGGCTTGAGAAACATAAGAGTTTTTTCTCCGATACTACTTACCAAAAATCCATCCTGGAAAGCAAGAAGAAAGTGTTTGACAAAGTGTACAATGTGAAGAACAAACTACAGAATGTAGACTTCCTCCCAGTAAAACAGCTCATGGATGAGGTTATGGAGAGATTCCAGAACTGCGTGGCTGGAGCCAAGGACTGGGAGAAGCAGCTGGAGACCCTGTCTAAGCTGTGGCGGACGCTGCACCAGAAGGAGCAGGTTCTGGAGGAGTGGCTTGACAATGCCGAGACCGTCCTCGATGACAAGGAAGACGATCCCGAGAGCCTGTTACGCAAACACAAATTGTTCTTTGATCGTGTTGATCAACGAATCCTAGACAATTACCTAACAGTAGGACAGGAGATCCTACAGCTCTTACCCGAAGGTGACAAGGCCAATTTGAAGAGAGACATGGCTAATCTGCAGGCCAGATGGAAGAACATACACTACAATGCTCCAATGAAGCAGTTGAAACTGGAATTTGCTCTACCTGAAGATAAATTCCTGGCCACTGTGATGAATGCTGAGAAAATCATCAGAGAACACCAAGAGAAGCTGAGTCGCAGAGAAAATGTCAAAGATGCTCTCATGAAACACAGACAATTGTTTCAAGATGGTCAGATTGTTCAGACCTGTGAAAAGTGCCTCGGTTCTATGGAACAAGTTTCCAAAAAGTTGCTGCACCACAATGCAGAAGACAAGTCATTATTACGCAGATATGAAGAACACCTAGAAAGATGGCAGCGACTAAGATCAGTGGCTGACAGCACACATGAACAACTGAAGCAGCTCCCAGAGAGATGGAAGGAATACAACTCAAAATTGTCGGACTTCAACAAGTGGGTGATGGAGGTGGAGGGTCTGGTCCAAGCCATGCAGAAAGAAGATCTCACCAGTGATGAGTACAAAGACATGCTGGCCAAGTTCCAGAAAGCCATGAGAAACAAGAGCAAATACGCTGAGGATGCCAAATGGCTTTCTGAGAATTTGAACGAACTTCTCAGTGACAGCTCAGGTTCCGACTCCCGCAAAGAGCAGGAGCGACTGGCTGCCATGCTATCTCGTTTCGGAAACCTGGACGTGACAATGAAGGATGCGTCAGAGAAGTCTTCAGTGTTTTCCAAGAGCTTTGAGTACCGCGATGGTCTGGAGCGGCGGTCCAACTGGCTGGAGGAGACACAGAGGCAGGTGATGGAACACCCAGCTATTGACAGTCTGGATGATGCCCGGGCCTACCTGCAGGAACATGAGGCCATTATGATGAAGCTGGAGACGGAGGCAGCCAGCATTCAAGCTGACATCGAGGCCGGCAAACGTCTTCAGAAACAGAAAGATGCTCCATCGTTTATCGGGAAATCTGTGGACGATCTCAGTCGAAAGTGGAAGGATACAAATGAACTGGCCAAGTCCAAACATACCAAGCTTAAGGAGACTCTTCGTAACTGGGAGCAGTACGAGGGAGAGAAGAAACACCTGATACAGTACCTCAAGAAGGCCGAGACTGAACTGGAGAAACCACCGGCCTCGCACGGACAAGACTCCGCACAGAAAGACTTGCAGACCAAAAAGGAGCTACACAATACCTTAAACAAACTGAAAGGCAGTTTGTCAGAGATGCAGAAGCTGAATTCCGTGTTAGCAGAGAGTGCTAGCCGGGAGAGACAAGGTCCACTCAAAGGAGAAGTGTCTGACATCGACAAGCGTCTGCAAAATGTGTCTGTGCGTCTCAATGCCAAGCTGGCTGATCTGGAGGGAACAATCGCCAAGTGGTCCGACTACTACAAGCGGTTGAATAACTTCAATGACTGGCTCAACCAGAAGGAATCGAACCTCAACCAGGTCTATGAGGAGAAGAAAGATCTGCCAGAGGAACAGCTAAGCAAAGCAGAGACTATTTGCTCTGAGGTCTACGAAAACCACATCACTCTTGAAAACCTGGAGAAAGATGCTCGAGGTCTGTCTCAAAACTTCCGTTCACGTGAGACAGCAGCCCTTAAGTCGAAGCTGACGACCATCCGCCGACAGTGGGAGAGTCTGTGTGCTCGCGCTAAAGACCGCAGTACAGCACTGTCTGGCAACGTGGCACACTGGCAGCGGTACCAGAGTCTACAGGAACAACTGATGCCGTGGATCGTCAAAGCAGAGAAATATTGCGCGACTGAACTACCCAAGTGTTCGTCTTTGGAGGAAGCCAAGGATCTGTATGACCTTCATCAGGTAAGCAGATTTTATATATACTTTTAG

Transcript

ctg233-7.1-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan
PF00435	Spectrin	Spectrin repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001589	Conserved_site	Actinin-type actin-binding domain, conserved site	Interproscan
IPR001715	Domain	Calponin homology domain	Interproscan
IPR002017	Repeat	Spectrin repeat	Interproscan
IPR018159	Repeat	Spectrin/alpha-actinin	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR047291	Domain	Nesprin-1-like, second calponin homology domain	Interproscan
IPR052403	Family	LINC complex-associated protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47535	MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005640	Cellular Component	nuclear outer membrane	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007097	Biological Process	nuclear migration	Interproscan
GO:0034993	Cellular Component	meiotic nuclear membrane microtubule tethering complex	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg233-7.1-1 global RNA-seq network