Gene detail

Detailed information of ctg210-6.3-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg210-6.3-1	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13	chr4	29224144	29240162	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg210-6.3-1

GAAATAGTCTATATGTTCTTAGAAAGACATCATTTTTTAGCAATCATGCCTAGAGACGTTGGAGCTTATTTAAGTGAACAACAGCGAAAAAGCAGTGGTGATCTTGCTACAGAATGGGGAACTATTGAAGAGTTATATAACAAAAAATTATGGCACCAGCTGACACTGAAACTTCTAATCTTTGTGAAGAATCCAGTATTTTCAAAAGGAGATGGTTTATTACGGCTTTATGAAAATGTTATTGCCGACTTTGAACACAGGATCAATCCTTTGGCACTTATGGAGATTGTGATTTTTGTGGTCAAACAGATAACAGATTCAAAACAAGCACTGGAATTTTTGGAAAAAATTAATGAAAAGGTTAAAAGCAGTGACGAGGCCAGGATTCTGTGTATGACACAAATGGGAACAATCAAATTACGAAATAAGGACTTTGATGGAACAAAGGCTCTGATAGAAGAAGCAAAAAAATTGCTGGATTGTATAGATGGAGTCACAACCATCCACGGACGTTTTTATGAGTTATCCAGCAATTACCACAAGCTGATGGGTAACCACGCGGAATACTACAAAGATGCTCTGCGATACCTTGGCTGCATTAATCTCGAAGATATTCCATCTGGTGAACAGACTGAGAGGGCATTTAATCTAGGTCTTGCTGCCATATTGGGTGATGGTGTTTACAATTTTGGAGAACTGTTAGCACATCCTATTCTGGAATCTCTCAAGTCAACAGACAGAAATTGGCTTGTGGATCTTCTGTTTGCTTTCAACAGTGGTAACATTTCACAGTTTGAGATTCTCAAGAAAAGCTGGGTGCAACAGCCTGATTTAGCTGGTCATGAGGTGCAAATGAGGCAGAAAATTTCATTACTGTGTTTAATGGAGATGACCTTCAGGCGACCTGCTACAAACAGGCAATTGACATTTCAAGAGATTGCAAGTGAAGCAAGGATTACATTGTCAGAGGTGGAGATGCTGGTGATGAAAGCACTGAGTCTTTCCCTGGTGAAAGGATCTATTGACGAGGTGGATGAGAAAGTCCACGTCACATGGGTGCAGCCTCGTGTACTTGACGTCATTCAGATCTCTACGATGCAGTCACGGTTAAAGCAGTGGTGTGAAGACGTTAAGCAGATGGAAAAACTGGTGGAAGTCCGAGCCCATGACATTCTTACATAACAATTGTCGGACACATCCAAAGGATATTAATACGAACATTATCATTACATTCTTATGTTGTGTGTGTTGGATCACAAATATAAATTCATTTCAAATATGGTGTCGTGTCATCTTTTGCATATTTGTCTTTATGTTCAAGATGGCTTCAAAGCTCTCAAAATTGTTTAATATTTTAGATAAGGGAACCAAGTGTTATACTTCAAGTATTCTTTCCCCATATTTATTAGTACTAGCATGAGGGTGCTAGCAACTGGATTGAATTTGAAAGCTAAATAAAGCATTAATGCAACTGGATCATTCTCACCTTTGTCATTAAAAAATTAAATGGATGTGAACATGACAATGAAATGTCCAGTCTGATTTCATGAAACTACAAACAAGGAATTCAGATAGATAAGTGTGATCTGGGCCCATTTTCACAAAACATCGTAAGTTTTGCATGTAACATAAATCTACGACTAAACCACAATTCTTATTACTATTATAGTACAACAAATATAGTTAAAAACACACACATTTCATTTTCTTTTGTCCTTAAAATGCTACATTTTCCTTAATTATGTAATTTTCTTCGTGATATAAATACCAAACACTTGTAAATGTATGCCCGGTATAATGCTTGTCTCGGACATAAACTTGCGATGTTTTGCGAAATTGCTCCTACATGTTCTAGACTTGTGTTGTGGATTAGGTACTTGAAGGTTTGCTCTTCTTTTTTTATTCAGTAAGATAAATGTTCTCTTCTGTTTTTTTCTTTTGTTAAAAGCATGTCTTCAATTACTACAAGAATGTGTTTGTTGAAATGAGATTTGACAGAATATAAAAGAAGATGATACTGGGCGAGTTATGAAACAATCAACATTGGTTGTATTCTTTGGTTTGTATCAGCTTGGGATGCAAATACTCTAAAATCTATGGTACACCAGGAAATAATTTCAGTGTGTTCTGTTCTGTTCTAAGTACAATGTGTATCAAAAGAACAGGCTGAACAGTTTACAGAGTATCAGAATAATATTTTCAGGAAATTTATCTTTAGCTTGGTGTATAATTTATTATATTCCCATTCTCACTGTCTTTGAGCATCTTACTTTT

Transcript

ctg210-6.3-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01399	PCI	PCI domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000717	Domain	Proteasome component (PCI) domain	Interproscan
IPR035298	Family	26S Proteasome non-ATPase regulatory subunit 13	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10539	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005198	Molecular Function	structural molecule activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0008541	Cellular Component	proteasome regulatory particle, lid subcomplex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg210-6.3-1 global RNA-seq network