| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg197-1.0-1 | CBP/P300-RELATED | chr6 | 67535453 | 67544342 | - |
| CDS | |||||
| ctg197-1.0-1 | |||||
| Transcript |
| ctg197-1.0-1 |
| Protein |
| ctg197-1.0-1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02135 | zf-TAZ | TAZ zinc finger | Family | Interproscan |
| PF13445 | zf-RING_UBOX | RING-type zinc-finger | Domain | Interproscan |
| PF17123 | zf-RING_11 | RING-like zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000197 | Domain | Zinc finger, TAZ-type | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013178 | Family | Histone acetyltransferase Rtt109/CBP | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR027370 | Domain | Zinc finger, RING-type, eukaryotic | Interproscan |
| IPR035898 | Homologous_superfamily | TAZ domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13808 | CBP/P300-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000123 | Cellular Component | histone acetyltransferase complex | Interproscan |
| GO:0003713 | Molecular Function | transcription coactivator activity | Interproscan |
| GO:0004402 | Molecular Function | histone acetyltransferase activity | Interproscan |
| GO:0005667 | Cellular Component | transcription regulator complex | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0016573 | Biological Process | obsolete histone acetylation | Interproscan |
| GO:0031490 | Molecular Function | chromatin DNA binding | Interproscan |
| GO:0045944 | Biological Process | positive regulation of transcription by RNA polymerase II | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg197-1.0-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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