Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
ctg1804-0.0-1 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED | ctg1804_pilon_pilon:::debris | 31487 | 55790 | + |
CDS | |||||
ctg1804-0.0-1 | |||||
Transcript |
ctg1804-0.0-1 |
Protein |
ctg1804-0.0-1 |
Gene family | Subfamily |
---|---|
Ubiquitin Family | UBD|Other|SH3 |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00018 | SH3_1 | SH3 domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001452 | Domain | SH3 domain | Interproscan |
IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
IPR036028 | Homologous_superfamily | SH3-like domain superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR15592 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003729 | Molecular Function | mRNA binding | Interproscan |
GO:0005515 | Molecular Function | protein binding | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0043484 | Biological Process | regulation of RNA splicing | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for ctg1804-0.0-1 global RNA-seq network |