Gene detail

Detailed information of ctg1673-1.10-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1673-1.10-1	SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE	chr11	16052605	16061427	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1673-1.10-1

CACAACAAAGCGTCAGATATATTTGTGCATGACTCTGAATAATATTTTTATTTCTAAGCATATTGAGCAAGATCCGTTCATTAACATGAGACCCTTTGGTCACTTAAAAAATCCGCGAATACCGGTAGATTAAAAAATTTGATTTTTTTTCCTTAGTGTTGGCAACATTGACAGTGATATTGACGGTGCCACAGTGACAGTGTTAACAATGAACAACAACAGAAATACATTTACAAATATTGACGAAGATATCGGCTAAGAAACAATGGATTCATTCTTTAAATGGAGATCTAGAAGAAACCAAATTGGACAAAGAACGTCATGATATCCTGTAGATAAAACCAGAAGATTCACTTCATTTTGATTCCAATATGCAGGGCACTTCAAGCTCTGTTACCCTGTGTGGTTTGATAACTGTTTTGACAATCCTTGAACACATATAAAACCGGAAGATTCACTTCATTTTGATTCCAATATGCAGAACACCTCAAGCTCTAGTACCCCGTATGGTATGATTACTGGACCAGCCTGTTTTGACAATCAATGGACTCGTATAAAACAGGAATATAACCCTCATTTTGATGCCAATATGCAGGACACTTCAAGCTCTGGTACACCGTATGGTATGATCGATGGATCAGCCCGTTTTGACAATCGTTGGACATGTATAAAACAGGAAAATAATTCACTTCCTTTTGATTCCAATATACAGGGTGCTTCAGGCTCTAGCAGCGTGCATGGTATAGCCACTGGACCAGTCTGTGTTGACAATCAGTGGACTCGAATAAAACAGGAATATAACCCTCATTTTGAACGCAATTTGCAGAATGCTTCAAGCTCTGGTACCCCACATGGTATGATCACTGGACCATTCTGTTTAGACAACAGTCGTTTGAAGACTGAAGCGCTGCAACCTGACAACTCTTTTAGCTTAAAGAGAAGCTATGATACAGCTGTGTCTGATTATTACCAGTATCGTAATACTGTACGAGTAGAGCACAAAGATTCAAATAAACTGGGTATGCCTTTGTCTTGGACAGGGAATAACAGCTTTGAAAGGTATGATGGTAGTGACATGGGGATGCTGCCATCTAGGACAGGGAATAACGGCTTGGAGAGGTGTTGCGATGGTAGTGACAATGGGATGCTGTCATCTAGGACAGGGAATAATAGCTTGAAAAGATGTTATGATGGTAGTGACATAGGTATGCTGTCATCTTGGAGAGGGAATAACAGCTTGGAAAGGTACAATGGTAGTGACATGGGCATGCTGTCACCTAGGATGGGGAATAACAGCTTGGAAAGATGTTATTATGATGGTAGTGCAATGGGTATGCTGTCGTCTCGGACAGGGAATAACAGCCTGGAAAGGTGTTATTATGATGGTGACATTAAAAAGAAATGTTATACCATGGAAAATGCATTCAAAAGTGATGAAGATTATACCCGTGTTTCCGAAGGTTATGCCAGGAACAGTTTTGGTCAGATATCAAACCATATTCCTACATCATTCGTTCCAGCAAAATACCATCATGGTTCTGCTGTTAATCAAAACGAAAAATATTTCTATTCCCACAATGCAGAAATTGGCCAAGGATCCATTTCATGGAATAACCCTATGGCACTTCAGGGACCTTTTATTCACCACACAAAATACCCGAACAGTTATGATGCTGATAGACATACATCCTTCTTTCCAACAATATCGGAAACATCACCGAATCCTAATTATTCTAATTACATGCATAACGGCCCCGAAGGGTCATCCGGCTCACATTTAATTGCAAGAAATCCAGAGCCGTTTTCAAGTACATTTAAGACTTGTGCAGCAACATCCGACAGACACAGTACTGAAAACAGGTGTCATTCTTCAGGACAAGGTATTTACAAGTTTCAGTGTTCACCGAACGAAGCCGGGCTGATAGCAAACCAGTACATTCTTATTGAAAAGTGGCAGTGTGAGAGACTAAGGGAGATAACCCTGCCCAGCAAGGTTGCCCATGTCTACAATCCGTTGGAGTACGCGTTTGAAACGCACTATGATTTCATATCCAAGTTCTGCAACTCGGAGAAGCACATTCTGTTTCTTGGGATGAACCCAGGACCGTGGGGGATGTCGCAGAATGGGGTTCCATTTGGAGAAATCAACATTGTAAAAAATTGGTTCGGAGTGACAGGTTCCGTGTCGAAGCCTCACAACGAACATCCCAAGCGACCGATTCTTGGTCTCGACTGTAAAAGATCTGAGGTGTCTGGTTCTCGGTTCTGGGGATTTTTCAAGGATATTTGCAAAACACCGGAAAACTTCTTCAGAACCTGTTTTGTATACAACCTCTGCCCAATGGCGTTCATGACGGAGTCCGCTAAGAACATAACCCCTCCGCAGCTGACGGCCAACACCCTTCTCCAGGTGAACTCAGTCTGTGATGAGGCTTTACTCAGAGTGGTGCAGCTACTCAATGTGAAGGTGATTGTCGGCGTGGGGAAGTACGCCTACAACCGCGCCCTCAAAGTGATGACGTCGGCAGGCATCAACAGCGTGGCGGTGGATCAAATAATGCACCCGAGTCCCATCAACCCTGCTGCTAACAAGGGTTGGAGTGGAATCGTTCTCCAGCAGTTGCAGGAGAAAGGATTGTTGGCCGTTATTACGCAAGACGGGGAAATAAAATTAGAATGAAATTAGAAACTAGTAACTTGTTATTGGTCGATTGATTGTCCAAAAGGCACACTTAGATCCCGTGTTTGGAGTCCTCGAAATGAACAATTTAGCATTCTGCGCTCCCGCCTTAAAAAGCTGTTGCAAACTTGATCTGCAAGGTGCGGGGCAAAGCCCAATGGTAAAATGTCCGGCCGATGCATGGTCAGTCTAAGTTCCATCCCCATCGATGGGCCCATTGGGCCATCTCTTGTTCCAGCCAGTGCATCATGACTGGTATATCAAAGGTCGTAGTATGTGCCGTCCTGTCTGTGAGATGGTGCATATAAAAGATCCCTCACTACTAATGGAAAAATGTAGCGGGTTTCCTCTCTAAGACTATGTCATAAATACAAATGTTTGACATCCAAAAGCCGATGATTAATAAATCAATGTGCTCCAGTAGTGTTGTTAAAGAAGGTGTTATTTGTTGACCTCGGCTCCTGTGTTTGCAGTATTCATAAATATTCATAACAGCAATCAGCAATGCAGCTTCATTGTCACACATTTGATAACTCCCAGAGGAACTGTTAACCCACAAGTTTCTTATTAACAAGGGATTTTTTATATGCACTCTACCCCAGACAGGACAGCACCTCTACTGTAGCATCCTGCAGCTGCCCTTGTAACCGAGATAATATGTGTGATCTTTCGACCCTTTGAACAGACACCGACACTTCAGTTCAAATAATTTATTAACAGTAACAATTTACATGTATTACAAAATAGACAATTACAAAACATTGAAAGAACATTCATACCACTATTACAATAATATTAATATATTCTCTATAAAAGGAAAAGAATATTGAAAGAAAATATAAAAGACTTTACAGACGCACTGCTTTTTATTTTTGGTTTTCTTTAATAAATTATATACTGACATCCAAAAGAAACTATACCAATACACATAGACTACTGAAGAAAAACCAAAGACATGTTGCATGTTTAAAACATATATTCATGAGATTGGTGTTTTGGCATATTGGAGAACAAAATTTCATTCCATAAAACGGATTAAAAGCAGAAACAAATATAACCACCATTTTATTTCCATTATTCGAATTATAAAGGAAATTAAATCATTTTTTGTCGGTATAATTTCTTTTGGATGTCAGTACAATTACAAAGGTCAAAGATTAATGTCAGGTCACCAGGTTTGATCTGTAATGATGCATGTAAAAAAAGGCTAAATGTTTTGCCATGGACAGCAACCTAAACGAACTGATTTGGCATTTTTATCGCATTCTATTTTCTTTAACCACTGTGTAAAAGTCTTTGAAAATGGAAGGTAAAAGTCTTTGAATTTGTTTGGTCTTTAAGGCCATGAACCCTGATACATGCATGTAGAAACCGGAGTCATTGAATTAAGTCATTAAGCCCACTACTGCATCCCCTAAATAGTCATGTGGTTATCACGTTAATAATTCTAGGTTACATCATCATAAACCATTACTATTACATCACCTATAGAAGTGATGGTAAATTCTTAGTCACGTGTTTAGCACATGTTAATAATTCTAGGTTACATCATACAGTGTATGTATATGGAAAATATAATCAACGGATTGAACCATTATTACTATATCCCTTATAGAGTTAGTTGATGGTAAATTCTTAATCATACGTTTTGCACGTTAATAATTCTAGGTTACAACATAAAATATACTTACCCCAAAGTAGATAGGTCATAAATGATTACATAAAATATAAAATTTAATATAATATATAAAATGTATAATATTTATATACCAATATATATATATATATGTCATGTACATTATATAAATCACATACAAAAATTATCAAAATCAGAAGTTTTAGGTGAAGGCAAAGTGTCCATGCTACACTTTAGAGCTGTAATAATGTGATTTTATACACAAACTATTTTGAATTTTAAGACAAGGTTATTCTATCCAAATTAAGTTATTTGTATAATGAAGGTATGAAAATATGACGTTTTACCTACAGCAATCTAATTAAAATTAGCTCCACTATTACAAGTGGATCTAACAGCAGCCAGTTGGAGCTCATGTCCTTACTTGAAGAATCATGCCAG

Transcript

ctg1673-1.10-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03167	UDG	Uracil DNA glycosylase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005122	Domain	Uracil-DNA glycosylase-like	Interproscan
IPR036895	Homologous_superfamily	Uracil-DNA glycosylase-like domain superfamily	Interproscan
IPR039134	Family	Single-strand selective monofunctional uracil DNA glycosylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13235	SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000703	Molecular Function	oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity	Interproscan
GO:0004844	Molecular Function	uracil DNA N-glycosylase activity	Interproscan
GO:0006284	Biological Process	base-excision repair	Interproscan
GO:0017065	Molecular Function	single-strand selective uracil DNA N-glycosylase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1673-1.10-1 global RNA-seq network