Gene detail

Detailed information of ctg1622-0.11-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1622-0.11-1	BONUS, ISOFORM C-RELATED	chr12	11627506	11648579	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1622-0.11-1

ATGATCTTATTTATATTTTCATCATCATTTGAAGAGCATCTTCATCAACTGGAATTGGTATTTAACCGTCTTCGGGAATACAATCTCAAGTTGGCACCCAAGAAATGCAGTTTCTTTCAGGATCAAGTCAAGTATCTAGGGCACATTGTGTCCGTGGATGGCGTCAAGGTAGATCCTGAAAAGATAGAAAAGATTGTCAACTGGCCAGAACCTACTAATCCAGAGCAGTTGCAACAGGTCCTAGGATTTCTTGGGTTAGCGTCTACGGCAGCAGAGCACAGTCGACAACATCAGAAGAAGGGATATGATGTCAGAGTTCGGGGTTCCATCCTGCAACCCGGCGACAGAGTTTTGGTTAGAAGATTGGCATTCGATGGTAAACATAAGATTGCCGACAGATGGGAAGAGGAACCTTACCTTATCCAAGATCAGCCAAACAAGGATATCCCTGTGTTTGTGGTGTGGAAGGAAAATGGACACGGTAAAAGTAGAACACTTCACAGGAACCTTCTGTTACCAATCGGATCGCTTCCCATAGCTATTGATGTTCCATATGTGCCAACACCAAAACCAAGACAACCAACCCAACGACAGCGACAAAAGCCAACTGAAGTTACTGCTGAAAGGATACCCCCAACGGAATTGGACGACGGAGCAACCCCGTCGGATGATGAAGACTATCTTCAAGTCGATTCTGTTGTGCTGGTTACAGAGGCAACAGTCACAGAACCAACAGATGCCAGCACCACACCTGCTGCTGACAGGGACTCTGTTGGTGTTATGGGTATAGACAGCACTTCGTCAAAGGATGATCATGAGACATCCCTTGTAGGTGAAGTAGCTAGTTCAGACCATGAGACAGTTGCGGATGAGACGGCAGCGGTTGAGCCGGTTGCAGATTTTTTGTCTGAATCTGAAGACATTAGGAGTCCAGTTCCAGTTCCAAGACGTTCCATTAGGGAGAGACGGCCTCCAAAGTGGATGACACATGGGGATTTTGCCATGATCAAGTCTTTGGGGTGTGACTGGAAGGACAGAGACAAATCTCCACGTATCTTGCCGTGCTTCCACAGTTTCTGCTGCCGATGTCTGGAGTCGATTTGGGAGAAGTCACCTGCTGGAGTGAGATGTCCCAACTGTCTGCAGGTTTGGACTCTTCAGAATACCATATCGACAACATTTCCAGAAAACAAGGTACTGAAGAATTTAGTTGAATATCTTACAATGAAAAACAAGGTGGATGAAATTATGTGCCATGAATGTCCTGAGAGTTCAAGGGCAACACTGCGTTGTTTGGACTGTCGGGAATTTATGTGCGAAGGATGCGCAATGTATCATAAAAAATTTGCAATGCCAAAGGACCACAAGACTATTTTGATTAAAGAATTGGTTAATATGCCTCATGATGATTTTTTTCACCAGACCGATACGTGCAAAAAACACAACATGGATATAGATTTATACTGTACGACGTGTTCAACTGATGTCTGTTCATCGTGTGTTCATGTCTCTCATAGAGACCATGAGATATTGGTTCTCAAAGATGTATATGAAGCAAATATGGACCACATGAAAACAACACTTAGAAATTTACAAACATCATCAAAAAGACCACATAAGTATAAATCAAGACTTTCTAAACAAAATGCAACTCTAGATTCGATGAAAGAAAATATTCTAAAACAAATTGATGATTCCTATGAAGAGATTATTCAGAAGTTGTCTGAGAAAAGAAAACAGACGAAAGAGGATGTCAGTTCAAACATAGACAAACAAAAAGGTAACAGAAACGAGCAGATGAAGTTGGTCGAACAGTCAGAAGTCCTGAAGGCGGACAAAGTTCTGCACTGTCAGCAAGCTCTGCAATTCGCACGAGCTGCAGAATTTATAGAAATGGCTCCGACCCTTGAAGACAAACTTCACTCTATGACGGAAGGTCCGGAACTGGTTGATATTCGTATACAAGAGGTTACCATGGATAATACATTTAAACAGATTGAGAAAATAATCGAGAAAACTGGTGTAATGTGGAATGGAATTATTTTCAACAAAAACGATCCAGACGAGGATGTGATGAAAAGAATTCTCTTCCCTGTTGATGGACAGTCAGAACAGTACAGAACACTTCTCTTGCCAACTGTAGAGTTTGACCCACAGAAGACGAACCGGGAGGAGTGTACTATTAACGAATCTGGTATTCTGGTCAACAAACCTTCAGAAGAAGAACAGACTGACCTGACTTCCGGTCTGCAGTGTTTCCTTGGAGTCACAGCCAGGACGCATGTCCCAACGTCTGGATGTGCGTTCTGGCAGATGGAAGTCGACTGCATGGTGCATGAATCGGCTGAAATAAACCAAGTGGTGGCCGAAGTGTTCGTTTGTCTGGGCGAGCTGTGTGACGCCAGAGCGGCAATGATGAACCACAAGCACGCTTGGGGTGTCACTGTAGTCAGCTGCATAACTCACAACAGTATATGTTTATGTGCTTATTCTAGAGGAGAGCAGCTGTGCTGTAGTCCTGTGACAGATTTCGAAACTAACTCACCATTTAAGATCACACTCGGGCTGTTGGTAGACATCGACAACGCCGCTCTCCACATTATCCGCGTTGACGACAACACAGTTGTACACTCCATCCCAAACATGGACGTGTCGCGGCCGCTGATGCCGATGTTTGGTGTTGATTGGTCTAATTATTATCACGTTATGGACAAATCTCCACGTATCTTGCCGTGCTTCCACAGTTTCTGCTGCCGATGTCTGGAGTCGATTTGGGAGAAGTCACCGACTGGAGTGAGATGTCCCAACTGTCGGCAGGTTTGGCCTGTTCAGAATACCATATCGGGAACATTTCCACAAAACAAGGTACTGAGGAATTTAGTTGAATATCTTACAATGAAAAACAAGGTGGATGAAATTATGTGCCATGAATGTCCTGACAGTTCAAGGGCAACAATGCGTTGTTTGGACTGTCGGGAATTTATGTGCAAAGGATGCGCAACGTATCATAAAAAATTTGCAGTGTCAAAAGACCACAACACGATTTCGATTAAGGAATTGGTTAATATGCCTCATGATGACTTTTTTCAGCAGAGAGATATGTGCAAAAAACACAAAATGACTTTAGATTTATACTGCAAGGTTTGTGCAACTGATATCTGTTCATCGTGTGTTCATGTCTCTCATAGAGAGCATGAAATATTGGATCTCAAAGATGTATATGAAGCAAACATGGACCACATCAAAACAATACTGAAAGATATTCAAACTTCATCAGAAAGACCACAGAAGTATACATCCAGACTTTCTGAACAAAATGCAACTCTAGATTCGATGAAAGAAAATATTCTAAAACATATTGATCATTCCTTTGAAGAGAGTATTCACAAGTTGTCTGAGAAAAGAAAACAGATGAAAGAAGATGTCATTTCAAACATAGACAAACAAAAAGCTGATAGAAACGAGCAGATGAAGTTGATTGAACAGTCAGAAGTCCTCAAGGTGGACCATGTTTTGCACTACGAGGATGTGATGAAAAGAATTCTCTTCCCTGTTGATGAACAGTCAGAACAGTACAGAACACTTCTCTTGCCAAATATGGAGTATAACCCACAGAAGATGAACCGGAAGCGGTTTAATATTAACGAATCTGGAATTCTGGTCAACAAACTTTCAGAAGTAAAACATACTGACCTAATTTCCGGTCTGCAGTGTTTCACTGGAGTCACAGCCAGGACGCATGTCCCAACGTCTGGATGTGCGTTCTGGGAGACGGAAGTCGACTGCATGGTGTGTGAATCGGCTAAATTACATAAACTGATAGCAGACGTTGGTGTTTGTCTAGACGAGCACTGTGACGATACAACAGGGATTCTTAATAACAAACATGCGTGGGGTGTTGCTGTGGCCAGCTGTAAAACTCACAACAGTATCTGTTTATTTCCTTTTTTCAGTGGAAAGTCTCTGCGCTGTATTCCTGTGACAGATTTCAAAACTAACTCACGACTCAAGGTCACACTCGGGCTGTTGATAGACACCAACAACGCCACTCTCCACATTATCCGCGTTGACGACAACACAGTTGTACACTCCATCCCAAACATCGACGTGTCGCGACCGCTGATGCCGATGTTTGGTGTTCACTCTCCTGGACATTTCGATGTTAAAGTGAGAGTATCGTCTGACACGGATCTCTCAGTGAATCGTGAACTGTTGGTCCTGCTCTCGAGTTTAGTGAAATAA

Transcript

ctg1622-0.11-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR043136	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR047153	Family	TRIM45/56/19	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006513	Biological Process	protein monoubiquitination	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1622-0.11-1 global RNA-seq network