Gene detail

Detailed information of ctg1619-0.0-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1619-0.0-1	MAJOR VAULT PROTEIN	ctg1619_pilon_pilon:::debris	79020	117424	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1619-0.0-1

ATGGCTACGGAAGAAACTTCGGATACAGAAAGAGATGGGCATTCTTCGTCCAAGTATAAGAATACTTCAGAAAACAAAAAGAAAGTAGCAGCGAAACAGGACAGAGACTGCCTTTGTGGTATGAAAGTTGTCATTACTGGAGGCTGTGGTTTTCTGGGCCTCCATCTTGCTCGACTGCTTTACCAAAAGGTTCAAGACATTCATATAATGTTGTTTGATAAGAGTCCTGCTGATGAAGCTGCCATGAATTTTATTACTAATGGAGTACCTAATGGAGATCGTGTCAGTTATGGTGGAAGACACAATGACATTATGATTCTAGAACATCTCAATGCAGCTTTTCAAGATGCTGATGTTGTCTTCCATTGTGCTGCAATAACATCCTCGTGTGCTAAAATAGATTTCAATAAAAAAATGCAGAGAGTCAATGTAGAAGGCACAGCAAATGTTGTCAAAGCTTGTCAGAGACAAGGTGTACGAGCACTAGTCTTCACTGGTGACTTAGCTCAGGTTTTAAGATCTGGACTTCATGTACAAGAGGGTATCACTGAAGATGTCATAGTTCGTGATCATGAGGAATTAGTAATGGATCATTTTGGACGTTCAAAGACTGAAGCAGAGAGGAAAATCCTCCAAGCAAATGGGTTCAAGACAACCTTATACACGTGTTCAATACGTTGTCCTCCTTTATATGGAGAAAATGATACCACATTCTTACCAAATGCTTTCTGGGCTGCTGAAAAGTTCTACAAATATTTTCCTTTAATTGGGCATCCTTCTGTGAAAATGACTGCTATGTATGTGGAAAATGCAGCCTGGGGTCATATATGTGCAGCAAAGAAGCTCCTGGATGAAAATGCCAGACTTAGAGTTGGTGTTCGTACTCAGGCGGTGTCTTTGTTGCTTGGCAACGCGAGACCACGCCCAATATTCGTGGTTCATGATGGCTCGTCCTCTCAGTTCAAAACAACTAATGCTGCGGCAGTGAGGATATTTCCTGAAGTCTTAACTCGTAATCCAGGAGATATAGAAGCTACTATCTACAATAAAGCTAAATCTGAGGATGGATGCATGAGCACAAGAAATGTGGCAATTCAGCTAATGCAGCAACAACAGCTTTATGTTGGATACCAACCGCAAACAGGAGGTGAAATGATGCAAAGGTCACGAGGAATGAAGGAAGGGAATTATGTGAACCATAGTATGCCAAGAGGTGTACGTCAACCAGATCCAACAGGATATCCCAGTGTTCTCACAAAATACTTTGACACAAAGTGTACAAGAGGGAAACGTCACAGGAACACACCAATCCATTGTGCTGAGGCAGTGAGAATGTTTCCTGGAGTCTCAACTTGTAATCCAGGAGATGTAGAAGCTACTATTTACAACAAAGCTAAATCTGAGATGTTAATGGCCAGATTTGAACAAAAAGCACGACAGCAAGAACAAATCAAAAAGGAACTCCTTGAACAGAACAAAGAACTAAAGAGCAAAACAGATACTTTAGTTACTGAGAAAAGAGCTCTAGAATTGAAACTAGCACAATCATCATCTTTGGAGGCAACTCAAGATGGAGATCGTGATGGTAATCCTCGTGTTACTGGTGAGGAGTGGCTTGTAAAGAAAGTTGGTGCATATTTGCCAGGAGCTTATGAAGAAGTTGTCGATGTTGTGGATGCCTACGTCTTGACTGAAAAGGTTGTCGGGATCGTCAACATTACTACTCTCAACAATCGACAATACTGTGTCATTTTAGATCCTGCAGGAGATGATGGCAAACCTCAACTGGGTCAGAAGAAGCTTATAAAGGGAGAGAAATCATTCTTCTTGAGACCTGGAGAGAGATTGGAGAAGGGTATTCAAAATGTCTATGTTTTGGGTGAAGACGAGGGTCTTATTTTGAAAGCCAGTGAAAGTTTTGTGGACAATGATTTGGGAGCTGAGCGCAGACCAGGAGATCGTTGGATGATCCGAGGACCTTTGGAGTATGTTCCACCAGTTGAAGTTGAGGTACTGACAAAACGCAAGGCAATCCCTCTTGATGAGAACGAGGGTATCTATGTGAGAGATATTAAGACAGGTCGTGTACGAGCTATCTGTGGTGCCACCTACATGCTAACGCAAGATGAAGAACTATGGTCTAAGGAACTTCCTCCTGGTGTCGAAGAGCTCCTCGCACAAGGGAAAGACCCACTGGCTGATCGCTCAGATCGAAGTCGTCCCTCTGCTCAAATAAAACGTGACAAAACAAAGTTGCATTTTGAAGTTGACAAGACCAATGCCGATGATGCTGCTAAGATCTTTTCTGTTCCAGATTTTGTTGGTGACGCATGCAAAGCCATTGCCTCTCGTGTCCGTGGTACTGTTGCTGGTGTCCAATTTGATGACTTCCATAAGAATTCTGCTAGAATTATTCGCTCGTCTGTGTTTGGTTTAGATGATCGTGGAAAAGTCAAAGATCGTTTCTCCTTCCCTGCCAATAATCTTATCATTACAAGTATTGATATCCAATCTGTTGAACCTGTTGATCAACGTACTCGTGATGCCCTACAAAAGTCTGTACAATTAGCTATTGAGATCACCACAAACTCACAAGAAGCTACTGCTCGCCATGAGGCTGAACGTTTGGAGCAAAAAGCAAAAGGTGCTTTGGAAAGACAAAAGATTACTGACGAAGCTGAAGCAGAGAAAGCTCGTAAAGACTTGTTGGAGCTCCAGGCCAAACAGGCCAAAGCTGAGGCTCAGTCTCGTGCTGAGGCTTCAAAGATCGAGGGTGAGGCTGCTGTAGAGCAAGCTAAGCTAAAAGCACAGGCCTCTAAGATTGAAGCTGTGAAGATGTTACAAGCTCTTGGTCTACGTTCTACACTCATTACTGACGGAAGTAATCCTATTAATCTGTTCAATACAGCTCATGGTCTTGTTGGCTCACTTCAAAGTGCTCCGAGAATTATTGAAGAGCCAGAGGATTAA

Transcript

ctg1619-0.0-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01073	3Beta_HSD	3-beta hydroxysteroid dehydrogenase/isomerase family	Family	Interproscan
PF01505	Vault	Major Vault Protein repeat domain	Domain	Interproscan
PF11978	MVP_shoulder	Shoulder domain	Domain	Interproscan
PF17794	Vault_2	Major Vault Protein repeat domain	Domain	Interproscan
PF17796	Vault_4	Major Vault Protein repeat domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002225	Domain	3-beta hydroxysteroid dehydrogenase/isomerase	Interproscan
IPR002499	Repeat	Major vault protein, N-terminal	Interproscan
IPR021870	Domain	Major vault protein, shoulder domain	Interproscan
IPR036013	Homologous_superfamily	Band 7/SPFH domain superfamily	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR039059	Family	Major vault protein	Interproscan
IPR041134	Domain	Major vault protein repeat domain 2	Interproscan
IPR041136	Domain	Major vault protein repeat domain 4	Interproscan
IPR041139	Domain	Major vault protein repeat domain	Interproscan
IPR043023	Homologous_superfamily	Major vault protein repeat domain superfamily	Interproscan
IPR043179	Homologous_superfamily	Major vault protein repeat domain 2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14165	MAJOR VAULT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003854	Molecular Function	3-beta-hydroxy-delta5-steroid dehydrogenase (NAD+) activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006694	Biological Process	steroid biosynthetic process	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1619-0.0-1 global RNA-seq network