Gene detail

Detailed information of ctg1592-1.12-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1592-1.12-1	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA	chr15	31088998	31159444	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1592-1.12-1

ATGCACTTCTTCATTGGTACTGAAGACTATTCACCTTATCAGCAACAATCGCAGTCCTATCAAAATTACCAAGTACAGACAGCGATCACTCATGACATGAGTAAGCAGTCGGTGGTAGCGGGACACATGCCTGCCCCTGGCATGCCTCAACAGACGGCCAACATATACCAACAACAACCTGGAATAATACCACCTCAGCAGTATTTTGGGGCTAATCAACAGAGTATGCAACCTCAGCAGGCATTCCGGCAGCCGACCTACCAGCCGGTTTACATGGCCATGGGACAGCCTGCCTCCCAGTATTCGGCAGGCAATGTCATGGTACAGCAACCACAAATGATGGGGTATTCTATGGGCCAAAGAATGCCAACAACTTCATATGCCATTCCACAGTCACAAACTCTTCAGCAGCAGTATCAGCCGTCTGCACAGTACCAGACGAGTCAGCAGTACCCCAATCAGGCCTATCCAATGTTCTACCAGAGTCAGCCTATGCCTGTCACTCAACCGCAGAGACCGCCCTCTGCTCCGGGACCAAGTGCAGCACCCACAAATAAGAGAGAACGCAAACCAATACAGATTTCTGATCCCAACACGGGACGAGATGTGACGGAGGAGATTTTGCATTTAAAGTCCACCCCTCCGGGTGGGAGTGCACGCAGTACTCCTGGTAGTTCTGGGGTACCGGGAAGTGCCGGGTCGACACCGCCGCCATCATTAGGTCAGCCCGACATTGCAGCTCAGTTTGCTGCCCAAGTTGCAGCCACACTACGTCCTGGGTCTGCTCAAAGTTCTAGTTCTCAGAGACAGGAGTATGGCCAAGTCGAGCCGGCCACTCCTCAGGCTGCGGCTTCGGAACTGATGCAAGACAAAGGTCCTCTGCCACCACCGTCTAACTCTGTACCTGCCACAGAGCAAGATCGAGTAGACAATTCGAACAGTGTCAGTAAAACTGCGCCTGTGTTACATTCAGTATCTGGTTCTAAGACGGAACCGAATCTCCCTGCAGAGAAAACACAGCATACAGAAGCCGCACCTAAACTAGTTTCCGTACAAGAAGTGAACATTGAGGTATTTTCCAGCGAGGCTCAGATGGATGCCCCAAGTGAGTTTGTGCCGAAAGAGAATATAGACACGACGGAAGAGGCTTTGGCACAGGTTGTTGAGTGTAACGCTGAAGTCACCGTGAGCATTGTGGATGTGGAAAGACCTGCAGCTGTGGCCCCGGAGCCTGTCAATGAAGTATTGAGCACCACTTCCCCAGATGTTCCAGAAAAACCCAGTGATGTAGATATAGATACTACTGCGGCAGACTCGAACATTTCCAAAGATGTGAAGTCAAAAGGAAAACGGAAGTTGAAGGATATAAACCGGAAAGGCGAGGAGAAAGTTGGAACGGACATGGATGCATTCCTTGATATTCAAGAAAATGAAGTACATGCATCTCCTGCTGACACAAATGCGGACACAGTCTCTACACCTGCTGCCGTTATTGAGTCTAAGAATGTAGAGTCATCAAAAATCGTAGTAGAATTGTCCAAGCCGCCAGCAGAGGAGTCGCCCAAGACCATGGTTGAGGTGTCCGAACCGGTGGTCGATTCAAGTAAGCCGGTGGTTGAGGTGTCAAAACCTTCAGTTGAAGTGTCAAAACCAGCAGTAGAGGAAGAGACGGAGAAATCTTCCACCCAGCATCCTCAGGTTCAAATTGTGATAACGGAGCCTGCATCTATGCCAAAGGAAGTAGAGATAGAAATAACGGATGCTAAAATGAGTAAGGATTCCGAAGTGAGCCGGGAAAATGCTAAAAACAACGTGAAAACAAATGAAACCAATACGGAAAAAACTGAAAGTGAGACGCAGAAATACAAATACAAAGAAGATCAATGGAGTCCATTAAATCCAGAAGGAAAGTGCCAGTATGACAGAAATTTCCTTCTGCAACTCCAGTTTGCAAAGGATTCCATGACAAAACCAAACGCATTGCCCAACTTGCCAGATATTATTCTTGATAAGCCTTATTCCAAAGAAAATAATTCTGTCAAGAACTTTGAACCGAGATACAACATGCCAGATTTTACACCTGGATATGCACGGCCAAAGATGGGTGGTGGCGGCGGCGGCGGTGGACAGAGCTCTATGGCCAAGCGAGGAAGCCAGTCGAGGATGCGTGGTGGTGAGCAGCGTATAATAAAGTCTGTGTCGATACAGCGGGAAGAAGTGAAACTACACAAATCTGATTCAGCGTGGAAACCCGGTCACAAGGAGGAGAAGAAAAGTGATGTTGAAACAAAGACAGAGGAGCTGAATAAGAAGGTGAAGAGTATTCTAAACAAGCTTACACCACAGAAGTTTCAGACACTTCTACAACAGATGCATGGACTTACAATTGATACCGAGGAGAGGCTCAAGGGAGTTACTGATCTTATATTTGAAAAAGCAATTAGTGAACCTGGTTTTAGTGTGGCATATGCAAATATGTGCAAGTATTTATTAATGTTAAAAGTGCCATCTGAAAGCAAACCAGGTGAATCTGTAAATTTCCGTGTGATACTGCTGACGAGATGTCAGAGAGAATTTGAGCGAGACAAAGATGACCAAGTTATTCTTGACAAGAAGAGGAAAGAGCTTGATGAAGCAGAGTCTGAAGAGAAAAAGGCTCAGCTAAAAGAAGAATTGGAATTAGAATCAACTAAAGCTAGGAGAAGGTTTATTGGTGAATTATTTAAATTAAAAATGCTGACTGAAAATATTATGCACGACTGTGTCTTTAAACTGCTACGATCTCGAGATGAGGAAAATCTAGAGTGTTTATGTCGACTTCTCACAACAATAGGAAAAGAATTGGAATCTGAAAAGGCCAAGCCAAGGATGGATCAGTATTTCTCACAGATGGCAAAAATTGTAGTAGAGAAGAAAGTCTCATCCCGATGCAAATTCATGTTACAAGATGTCATTGACTTGAGAGGAAACCGATGGGTGCCAAGAAGAGATGAAAATAAACCAAAAACAATCGAGCAGATACACCGAGAGGCTAAACAAGAAGAGATTCAGCGCCATATGATTTCACAGATTAATGCCCAACAACCAATGAAGCGAAATAGACCACCCCGTGGACCATCTCAAGGGGGCCAGGGAGGAATGGGAGAGGATGGCTGGAACACTGTCAGCAGCAAGGCCGGCATGAGAAACATTGAACGTAACATTGACGTGTCCAAGCTTAGAATTAACAAAAGTTCTGATGACAACATTCAGCTTGGTCCCGGTGGTGGATCAAGGTTTGGTGGGTGGGGTCGTGGTAGCAGTGGTGGTGGTAGCAGGCCATCACAGGAAGGAGAGAGACCCAATACTCCAGGCAACAGATATGCAGCTTTGAGTAAAGAGGATGACCATCGATCACGTGCGTTTGGTCGTGGTTCGAGTCCTCACAGAGGTCAAGGTCGTACACCAGGATCCTTCCAGAAAGGACGACTTGGTGGGCATGGGTCTCAGGAACTGGAGAGAGAGCGAGCAATTGCCAGTGCCAGAACAATTGTGAGTGGGAGATCAACCCCTCCATCTGCACCAGCGAGCCGAGAAGGCAGTCGAACACGAGAACCCAGACAGAAAGAAACCGAGAAGCCGGCGGAAGTGGTTAAAGAATGGACTGTGGATGAAATGGAACTCAAAACGAGGGCAATTATCGATGAATATTTGCATATACAAGACAAAAAGTTTGCTGAAGATATGGAAATTGATATTCCCAAGATATGGAAATATTTAGGAGAGCTTATTGGGCCAATGGTACAGGATGGAAGTGTTCCTTTGAGCTTCTTGCAGCAAGCTTGCAAACCTCTGATAGAGAACAATAAAGCTGGCATCTTGATCGCTGAAATCTTGCATGATGCCAGTCAAGAACTGGGTCCCAAGACGGTAGGAGATTTGTGGCGGTCATCTGGTCTTCAATGGTCAGATTTTGTTCCACATCAAGAAGTTGAGCAGTTCTTGAAAGATAAGAACTTGGAGTTTACAGTAGGTCCATCTTCGCAGCCTAGCACGCCTACAAGCAAAGTTTCATTTGACAAGATCTGTGACGACTTGAAAGAACAGCTCACGCAATCTCACTGTGATAACGAAAATGTATTTGACTGGATTGAGGCGAATGTGTCTGAGGAAACCACTAAAGATCCTCGATTCATCCGAGCCTTGATGACGGCTGTATGTTCCAATGCTATATCTGGTTCTGGTAACATGGCCAAGGCTGACCCGGAAAGCATTCGGTCACGACGAGCCTTGTTACAGAAATATCTGGAACACAAAGCTCTGTTTGAGCTGCAAGCTCTGTATGCTCTCCAGTGTCTCGTCTTCAAGTTGGAGCATCCACCTGGAGTCCTGCGGACATTCTTCGACACATTGTACGATGAAGAAATTATATCAGAAGATGCATTTAACCAGTGGGAAAACAGTAATGATCCAGCAGAAGTGGATGGCAAAGGTGTCGCTCTTAAACAAGTCGTGCAGTTCTTTGCCTGGCTTCGTGAAGGCGAAGAGGACGAAAACGACAGTTGATTCTTGGAGCTGTGTAGAAAACCTCAATAAGTATTTATTACTGAAGCTGCAATACTGAAATTAGGAATGCCGACAAATTGATTGCAACCTCACTTGTGTGGATATAAACAAGCGTAAATAGAGACGATTCTTTTCATAACGCGATTAACTGTATAAATGTGTACATGCTTTTTTTCCATGTTGCCGTTGTGATATAATGTACGATGATGCAGGCTGGGCTTTTTTGACTGGGTTGCGTTTTCAGTCACTGTGGCAAAACTGTTAATTGTCACATTTCGAGGGAACACCCCTTTAAAAAGGACCCGTTGTAGATCTTTCACTAGTGGATGTGCCCTAGAGGAACGAGCTGATGGATCGAATGTGTTTTGTGTATAAATGATCTTTTTGTAATTGGGAATTTATAATATTTGAAATGCATATTATGACATTACGTATGCTGATACCGTTTTTGTTTTTCCTTTGAAAGCACTCATATTTTGTTTTAATGACTGCAGTTTCATTTATTGTGCAAAGCACAGGATCGTATTTAAAATGCCTCAAATTTTTGTCCAAATGAATTCTCTGTCGGCTACTTGCATATGTGTATTTGGTTTTATTGGTGCTAGATTCGGGTTTGGATAAAAAAAAATCTTTACAAAGTGTATATATTTGTTACAGCACCAATTGACTTCCAAACCATTGTCAGTTTATTGGTATAAATCATGTTTTTGATATCCAAGGACTTAAATTATATTTATATTTGCATAATTGATATGCATCGGAAGTAGGGAGACGTGATTACTAAGATGTGAAATATTTGTTGAACAATTATTCAACTGTTGTGCGTATTCTGTGGTGAAGATAAACTACTTGCGGATTTTTAAATATAACATATGTATTCTTCCTGCATCTTAAAACACCTGACTTTATGTGACGAAGTATAATATAATATATAAAAAATATATATACATATAAATATTTCTACTATGTGCTAATGGTTATATAAAGACTTATAGACAGCCTCTGGTTTCTTTGAACTAAAAATGTGTGGAAAATGTTCATAAAGGTTTTTTCTGTAAGCAGTGAAAAAATTGGTTTATCTGTGATGAAACTTTTTCCCTCACTTGAATACCTGCAGATGCCAGCGACTAAATTTGATAAATTAAATAAAATGAAGTGTAAATAAATAAACGTTGACAGATCTTTAAACAAAAGGGTTTGTGTTTTTTGTGT

Transcript

ctg1592-1.12-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02020	W2	eIF4-gamma/eIF5/eIF2-epsilon	Repeat	Interproscan
PF02854	MIF4G	MIF4G domain	Repeat	Interproscan
PF21140	eIF4G1-like_eIF4E-bd	Translation initiation factor eIF4G-like, eIF4E-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003307	Domain	W2 domain	Interproscan
IPR003890	Domain	MIF4G-like, type 3	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR045208	Family	Initiation factor 4G	Interproscan
IPR049485	Domain	Translation initiation factor eIF4G-like, eIF4E-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23253	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016281	Cellular Component	eukaryotic translation initiation factor 4F complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1592-1.12-1 global RNA-seq network