Gene detail

Detailed information of ctg1480-0.5-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1480-0.5-1	DNA-DIRECTED RNA POLYMERASE	chr6	325326	383456	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1480-0.5-1

ATGAACCTATTTTTCCAGGAGAATGTGAGCTCTGTTGCCATGGAAACTGTCTACACAGTTTCCGCACATTGTTTTCTGTTAAAGATGAACGTCTTGTTTCAGGAAAGCGTGAGCTCTGTTCCCGGGGAAACGCTGACACAGAAGCTGCAGTTTGCGTGGTCCCGCCTCCAGGCACATGTCAACTGTGTGATTGACAGCAGCCTCGACAGACTTTCGACCGACAAACAGCCAGGAATAAAACAGCTCTTGGAGAAGAAGGAAGGTTTGTTTCGGAAACACATGATGGGGAAGCGTGTCAATTTTGCTGCGAGGTCAGTTATCTCCCCTGACCCATGTATCAACACCAATGAAATTGGAGTGCCAGATGTGTTTGCAAAGAAACTGACGTACCCGCAGCCTGTGACACCGTGGAACTTCCACGAACTACAGCAGGCAGTTATTAATGGCCCGGTGAAACACCCTGGTGCTACCATGGTGATCAATGAAAAAGGCTTGACAACTCGACTGTCAGATACTAACCACATACAGAGGGAAGCAATCGCCAAGACACTGTTAACCCCTTCAGTGTCAACAAGCTATCTCCTCAAACCCAAGATGGTCTTGAGACATCTGAAGAATGGAGACTTCCTCTTGTTGAACCGACAGCCATCGCTACACAAACCCAGCATGCAGGCACATCGGAAGACCCTGCGCATGCACTACTCAAATTGTAAGGCTTACAACGCTGACTTCGACGGTGACGAGATGAACGCACATTTTGTACAGAGTGAACTGGCCCGGGCCGAAGCTGCCATCCTAGACAATCATGGATTTGTGAAAGACGTGGCTCCAGCTATCATCAAACCGCGTAAACTGTGGTCAGGTAAACAGATCGTGTCCTCTCTGCTGATGAACATCATCCCGGATGGCCGACCACTCATCAATATGGATGGGAAATCTAAAATACCAGAAAAGGTAGATAACACGACCAGCCGCATTACACATCACGACCAGCCGCATTACACATCACAACAGGATGGTTTTCTTCAGGTAGATAACACGACCAGCCGCATTACACATCACGACCAGCCGCATTACACATCACAACAGGATGGTTTTCTTCAGGTAGATAACACGACCAGCCGCATTACACATCACGACCAGCCGCATTACACATCACAACAGGATGGTTTTCTTCAGGTAGATAACACGACCAGCCGCGTTACACATCATGACATGATGGTTTTCTTCAGAGGTGACCTCATTAACGTGTATTCCTGTTATTTCAGAGCTGGCCTCATTAACGTGTATTTCTATTATTTCAGAGAGCTGGCCTCATTAATGTGTATTCCTGTTATTTCAGAGCTGGCCTCATTATCATGTATTCTTGTTATTTCAGAGCTGGCAGCGCCCGGGAAGACGGCGTGTACAGAACTCATGTATGGTGGGGAAGTTGCAGGAAAGCTAATTACCTCCCTTGGGAAACTATTCCGAGCTTACTTACAGATCCGCGGCTTCACTCTCGGAGTGGAAGATATTCTTGTGACCAAACATGCGAATAAGTTGCGTAAGAATTTCATCGCGGCGTCCCCGGACTGCGCGGTGGACGTGGTGGTGACTGCGCTCGCCGTTGACCCCAACATCTCCGACTCGGATTTGGTGAGCAAGATGAGAGCAGCTCACCTGAGTCGAGACGACCGGCCAATGAGAGAGCTCGATCTCGCCATGAAGTCGAAGACCGACGAGATACAGAACAACATCACCAGAGCCTGCATGCCCCATGGTCTGCACAAGGCCTTCCCGTACAACAACCTGCAGCTGATGGTGCAGTCTGGAGCTAAAGGGTCAACATTCTACTATGGGGAGGATGGTCTTGATGTGATGAAGACCCCGTTCCTCACTCCCAAACAGTTTCCCTTCCTCGTGTGGAACAGAAATGCACTGGATGAGGTTATCGTATCTGACAATCCCAGAAGCCTAAGAGCCATTAAGAAAATTAATAAGAAGATAAACAGCTGGAAGAAGAAAGAAGCCAAACGCAGCAGTGACGGTTCTAGGAGTTCTGGTTTCCTCAGGTTCTACAGAGAGCGAGCATCCGACCTGACAGGCAATACTGACAGAAATACGATTATTCTGGGTTCCGGTCGAATCCCAGCAGCTAGGACGCTGGAGAAGGCTTGGTTCGCGCTGTCTGCCGACGAGAGACGCAGGTCGGGCTTCTCATTGGCTTATTTATTTATCACTGTTTTCATTGATACAGCCGACACTGTCAACGATGCCCGGACCCAGTGATGTCCGTGTATAAACCGTCCGAACACCCGACCGTCCTATCAGAGAAAATACCAGACTTGCTCGAAGAGTTTGATGAGGATCACTTTACTAAGATTCTGAAGCAATGTCCTAGTCACACTGTGGAAGATTTCCAGGTGCAGGATTTCCGAGATATGTTGATGGGGAAGGTACTCAGGTCTATGGCAGAACCGGGGGAAGCAGTTGGGCTGTTGTGTGCACAGTCTATAGGTGAACCATCCACACAGATGACCTTGAACACATTTCACTTTGCTGGACGTGGAGAGATGAACGTGACCCTTGGTATCCCGCGGTTACGGGAGATTATCATGGTAGCTAGTGCAACTCTGAAAACTCCATCAATGGACATTACTGTGCGTGATACAGGCAGCGCCCTCTACCAAGCAAGGAAGTTACAGAAAAAACTCAACAAAGTGGTGTTGTCTCAGGTTCTGCAAGATGTAGAAGTGTCTGAAATGTTGTCCATAAACCACAAGTCCAAATTGTAAGTAGTTTCACTTGTATATCAGTTAATATGTTTTAGAATAAATATTTAGTTGGTGTTTGTGTTCTGTTGTCTACACTATTTATCATTTGACATTATTAAATGTTATTACTGTTGTTATTTTTCTAGGATCAGGGTTTGTACGCGCCTGGAAAACCCTTGAAAATAAACTAATGTATTCCAGTGCTTGAATACCCTTGAAAATCATCTTGCGGTCTGAAAAACCCTTGAAAATGATAATTTGATGTCAAATAAAATATAAACACCTAAAACAGAGGCTTTATTTACTTTATTTAACATGTAATTAAATTATTTGTTTGATTTCCGCAGCACAATCAAATGCCAATCGGCGAGCCAATCGATGTTTACTGGCTCAGTTGACGTGTGAATGTTTGTTCTTTTTTATCCAAGCGACAGCGTCGCCATATTGGAAAAGAAAGTTTGTCACTTTTTGCCGTTGGGTATTTAGCAAGTTCAGGGAGCGTGTCAAGTTAATGAATCTATTGTAAACCCACAAAGATGGTTGGCACTTGCGTGTTTAACGACCTGTGGATACAGGCAGTGAATTATAAGGACTGGTTGGTGCATGGACACGACAAACACAGCGCAAGATGCACCGTTTGTACTCGCAATTTCAGTGTGGCAAACATGGGGGAATCGGTGCTAGACTAGCCCTACCAGATTTTGAGGATGTACATGTATAACAGAGGTAAAGTTTAGTCATAAGTTGTCCACCATTAACTCGGTAAGGTCGTGGAATTTTGGTAAAGTTGACCTGGAAAGTGCTTGAAAAAGCCTTGAATTTTGACTTGTTTTAAGTGTATGAACCCTGTAGGATTAATAAAGTGAGACTTTTGAACAAATTTGCGACTAGATTCGCTGTTCACGTAGAAATTAACAACTAGATTCGCTACTCGTGTAGAAATTAACAACTTGATTTGCTACTCACATGGAAATTAACAACTAGAATCACTACTCACATAGAAATTAACAACTAGATTCGCTACTCACGTAGAAATTAACAACTAGATTAGCTACTCACCTAGAAATTAAGAACTTGATTCGCTACTCACGTAGAAATTAACAACTAGATTAGCTACTCACCTAGAAATTAACAACTTGATTCGCTACTCACCTAGAAATTAACAA

Transcript

ctg1480-0.5-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00623	RNA_pol_Rpb1_2	RNA polymerase Rpb1, domain 2	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000722	Domain	RNA polymerase, alpha subunit	Interproscan
IPR006592	Domain	RNA polymerase, N-terminal	Interproscan
IPR038120	Homologous_superfamily	RNA polymerase Rpb1, funnel domain superfamily	Interproscan
IPR045867	Family	DNA-directed RNA polymerase, subunit beta-prime	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19376	DNA-DIRECTED RNA POLYMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001054	Molecular Function	RNA polymerase I activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003899	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0005736	Cellular Component	RNA polymerase I complex	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1480-0.5-1 global RNA-seq network