Gene detail

Detailed information of ctg1473-1.15-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1473-1.15-1	SUA5	chr6	56780733	56787123	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1473-1.15-1

ATGGTTAACAGTGTCAATGGACGTTCATTGGTTGAGTCTGCAAGCGAACCTGTAGCCAAGCAGCAGCAGCAGCAACAACAACAAGAAGTGACCAAGATTGAGTCAAACACGCCTTGCCCCTTGTTCGATTCGCGCAAAGCCTCCTCTTTACAGGACGCAGCCAGAATCATCGACAATGGCGGAGTTGTGGGCACTCCGACTGACACGGTCTACGCGATCGGTGCGTCCTGCAAGCACCCTGAGTCGATCAGGAAGATCTACGCGGTCAAGGAGCGACCTGCCGAGAAACCCATCTGTCTGTGTCTGTCCGACCTCGACCAGCTGCGAGCGGCCAAGCCCAATTTCACTCCTCTTCTCTGGTCTTTCATGGACAAGTGCTACCCTGGCGGCATCAGCTGCGTCGTGCCAAAAGGCGACTGGATGTACAACCTAGGTGTCGGTGACGCCTACGACATCATCGGAACCAAGGATAGCATCTGCATTCGTATTCCCGACAGTTCCGTCTTGGCGTACCTTGTTTCCGTTTCCGGTCCCATAGCCATCACTTCCGGGAATCCTAGCGGTGGCGCTGACAGCACGCATCATGACATGCTTATCAATTCATTGGGCCACAAGCTTGATGGTATGATTTGTGATGGAGAATCCAACGAAACGTCGGCGTCTACGGTTGTGAACTGCATGAAAATCAACGAAGGTGAAATCAGTTACTTCCGGATTGGCTGCACCCCACAGCAGGTCGTGGACGCTCACTTCCAGAAGGCAAAGGAAGAGATGGGGATCAAACCTCCGTGTCCCCTGTTTCAGTCAAAGAAGGCGTCTGCACTTCAGCAGGTGGCGGAAATTCTCGACAACGGCGGGGTCGTGGGGACGCCCACTGACACAGTATACGCCATTGGAGCTTCTTGCAAACACCCGGACGCCATCCGCAGAATCTACACGGTTAAAGAACGCCCATCAGAAAAACCCATCTGTTTATGTTTGTCATCTCTGGACCAGCTGAGAGAGGCCTCCCCGAACTTCAGCCCGTTGTTGTGGAATTTTATGGAGCATTGCTATCCTGGGGGAATCAGCTGTGTGGTTCCCAAGGGATACTGGATGTACAATTTAGGAGTTGGTGACGCCTTCGACATCGTCGGAACGAAGGATAGTATCTGCATCCGCATCCCGGATAGTTCGGTTCTGGCCTACCTCGTATCCGTGTCCGGTCCAATAGCCATCACATCTGGTAATCCAAGTGGTGGCGCTGACAGCATCCATCATGATATGCTGATTAACTCCCTTGGACACAAGCTTGACGCCATGATCTGTGATGGTCCCTCTAATGAACTGTCGGCATCAACTGTTGTTAACTGTGTCAATATCGATGAAGGAGAGATCAGCTATTTCCGGATTGGGTGTACGCCCAAAGAGGTGGTAGACAACCATTTCGAAGACGCCAAAGCGGAGATGAAGCAGCTGTCAGAGCCTCCTTGTCCACTCTTTCATTCCAAGAAAGCATCGTCCCTTCAGGAAGTCGCGGACATTCTTAATAATGGTGGCGTTATTGGAACACCAACGGATACCGTTTATGCCATCGGGGCATCGTGCAAGTACCCAGAATCTATTAAGAGGCTCTACACGGTGAAAGAGAGGCCCTCTGAGAAACCCATCTGTCTGTGCCTGTCCAATTTGGATCAGCTGAGAGAAGCCAACCCAGGCTTTAGTCCTCTGCTCTGGTCTTTCATGGACAAATGCTATCCTGGAGGAATCAGCTGCGTTGTGCCCAAGGGTGACTGGATGTACAACCTGGGAGTCGGGGATGCTTACGACATAATTGGCACCAAAGACAGCATCTGTATCCGCGTCCCTGATAGTTCCGTGCTGTCATACCTTGTATCCATTTCCGGTCCAATTGCCATCACTTCTGGCAACCCAAGTGGAGGTGCCGATAGTGTCCATCATGATATGCTGATAAATTCACTTGGGCACAAATTGGATGGCGTGATTTGTGACGGAGATTCTAAAGAAACGTGTGCCTCCACAGTGGTAAACTGCACAAAGATTGATCAAGGAGAAATAAGTTATTTCAGAATTGGCTGCACTCCAAAGGAGCTAGTGGACAAACACTTTGACGATGCCAAGACAGAACAGAACAACTCCAAGAACGCACCTCCATGTCCATTATATCCTTCACACCAGGCGTCTGCCCTACGTGAGGTTGCCCACATCCTGGACAACGGCGGAGTCATAGGAACTCCCACTGATACAGTGTATGCGATCGGAGCGTCCTGCAAACACCCAGACTCCATTAAGAAGATCTACACAGTGAAGGAACGTCCATCTGAGAAACCCATATGTCTATGTTTGTCAAGCCTAGACCAGCTGAGAACGGCTAACCCTGATTTCAGTCCACTTCTGTGGGCCTTCATGAAGAGATGCTATCCTGGAGGAATCAGCTGTGTGGTTCCCAAGGGACCCTGGATGTACAGACTGGGAGTCGGTGATGCCTATGATATCATAGGAACGAAGGACAGCATCTGCATTCGCGTCCCTGACAGTTCTGTCCTCGCCTACCTTGTCTCCGTGTCCGGTCCAATAGCCATTACTTCGGGAAATCCCAGTGGGGGAGCTGACAGTACACACCACGATATGCTGATCAACTCGCTTGGACATAAACTGGACGGGATGATCTGCGATGGGGACTCGAACGAAGCATCTGCGTCAACAGTGGTGAACTGCACGAAGATTGACGAAGGTTGTCAAATCACTTATTTCCGAATTGGTTGCACTCCACAAGATGTTGTCGACAAGCATTTTGATAACGCCAAGGTTGATGTCCAGAACGCAAAGACTACGATTGGAAGTACCATCGATATGCTGAAAATGCTGGAACTCAAGACTGGGGCGTGA

Transcript

ctg1473-1.15-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01300	Sua5_yciO_yrdC	Telomere recombination	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006070	Domain	Threonylcarbamoyl-AMP synthase-like domain	Interproscan
IPR017945	Homologous_superfamily	DHBP synthase RibB-like alpha/beta domain superfamily	Interproscan
IPR050156	Family	Threonylcarbamoyl-AMP synthase, SUA5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17490	SUA5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0003725	Molecular Function	double-stranded RNA binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006450	Biological Process	regulation of translational fidelity	Interproscan
GO:0016779	Molecular Function	nucleotidyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1473-1.15-1 global RNA-seq network