Gene detail

Detailed information of ctg1429-1.7-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1429-1.7-1	NOTCH LIGAND FAMILY MEMBER	chr10	5012196	5056594	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1429-1.7-1

AATTACCCAAGGTTTGACAACCAGTAGCTGATGATTAATAAATCTAGCAGTGTGATTAAACAAAACAAACTTTAACTAATGGAGTCGTAGCCTCATGCATGTCATTGATGTTTTTGCTTGACATGATGGCCTGGTGTTTGGTATTTCAGAGGCTCATGCGACTGCGGTAATCACTGGTCTGGTTGTGAGGCTGAACATGCAGTGGAAGATTGACTACAGCATCAGTTCATCATACCTCCACACGAGTCTCGTCAAGAACCTTACAGCCGCATTGAATCACAAATTCTCTGCATTAGATGATTTTACCACTGTAGCAAATATTGAAATTAGACAAGGGTCAGTTCTTGTCTGGTTTGAAGCCCAGTTTGACTCAGAGCTTTCTACTGAAACAAAAATGAAGGTTATGCAGACTGTGTCCAAAATGAAAGCATCTGGTCTGACTGTTGGTGGAGTGCATTATTCTTCAGCAGATATAGTGGTCAAGAATGGAACCTGTCCCAACATGCAAGGGATGGTGGGAGACTGTCAACAGAGATGTCAGACTGACAGCAACTGTACTGGCGACATGAAGTGTTGCAGCAATGGCTGTGGCCACGTCTGTATGCATCCAGTAGTCAAACATGATCCCTGCAAGAATGTCACCTGTCCATCTGGAACATCATGTCAAGACCAGCAAGTACAGTGTGTCGTTCCTCCCTGTCATCCAGTGGCTCTCTGTGTTGTGGTAAAGAATGGGAGCTGTCCTAATGTGACGGGAATAGTGGGAACTTGTGTTAGTAGATGTCAAACTGACAACAACTGTACTGGCAACATGAAGTGTTGCAGCAACGGCTGTGGCCACGTCTGTATGCAGCCAGTAGTCAAACATGATCCCTGCAAGAATGTCACGTGTCCTTCTGGAAAAACATGTCGACCACAGCAAGTACAGTGTTTCAGGGCTCCCTGTTATCCAGTAGCTCAGTGTGTTGGTACACCATGCACTACATTTCCATACGAACCCTACACGGACTGTCAAAATGGTGGTTCCTGCGCTAATGGAAAATGTTTTTGTTTCGGTCCTTATTATGGAGACAGATGTCAGTTAGTGGTCAAGAATGGAACCTGTCCCAACATGCAAGGGATGGTGGGAGACTGTCAACAGAGATGTCAAACTGACAGCAACTGTACTGGCGACATGAAGTGTTGCAGCAATGGCTGTGGCCACGTCTGTATGCATCCAGTAGTCAAACATGATCCCTGCAAGAATGTCACGTGTCCTTCTGGAAAAACATGTCGACCACAGCAAGTACAGTGTTTCAGGGCTCCCTGTTATCCAGTAGCTCAGTGTGTTGTGGTCAAGAATGGAACCTGTCCCAACATGCAAGGGATGGTGGGAGACTGTCAACAGAGATGTCAGACTGACAGCAACTGTACTGGCGACATGAAGTGTTGCAGCAACGGCTGTGGCCACGTCTGTATGCATCCAGTAGTCAAACGTGATCCCTGCAAGAATGTCAGCTGTCCTTTTGGAACAGTATGTCGACCCCAGCAAGTAGAGTGCTTCACAACACCTTGTTATCCCATAGCCCAGTGTGTTAGTGAAAAGGGTTGCAACTCTTCAATGGATTGCATGAATGGAGGGTCATGTGATAATGGTAAATGCCAATGCTATAAGAAGTATTATGGAGATCGATGTGAACAAGCCTTAACGGATATATCAGTCTGTGAGAGCAATTTGGACTGCTACAATGGAGGACAGTGCTTGCAGGGTAGATGCGCCTGTAAAGCTTCCTTTTATGGCTACGGTTGCCTACTGACAAGCAATTTCACCGCCATAAATTGCCAAGAAACGCTGTGCGAAAATGGAGGCAGCTGCTATGGGAGTTCTTGCTACTGTCCAGATAGCTTCTTCGGAAAAACATGTCAGTACAGTGTCCGTGAGGATGTTGACACATACCGTAAATTCCGATCTGATTTGAAGATTAACATGCCCTGGCGGGAGTCGTTCCGAGAGCTGTCAGATCACCAGATTATGAAAACCACCCTGGAACCAGGATCTGTCGTGGCATACTATACGGCACACTTCACTGATGTCATTGATCAGGACTCTGTACTGTCAACAGCCAAAGCTCTGGACAACATCACTGTGAATTTCTTTGGAATCAACTATTCTGTATTGCCACATGAGAATGTTTGCAGTGGGTTCATGTGTATGTATGGATTCCAGTGTTATGTCACACACATGGGAAAGCCAAGGTGTAACTGCTCCTATGGTTTCGGTGAACACTGTGAAAATGTTCCTTGTGGTTGTGATCCTAATTCTGAACGCTGCATAAAGCGAGATGTCTGTACAAATGGTGAATGTACGCCACAAGAAACCTGTGTTGAATCTATCTGTGACATGTTGCCGGTAGATGTGTGTGCGTATTACGGCAGCAAATGTGTGGGCGATATCATGGATGGAAGACTCTGCGAATGTCCGTCTGGCAAACGGGGAGCCTTCTGTGAACTTGACGGATACGCTACAACAAAATGCCAGCGTCAGAGTGACCTCTACCAAACGGCCATCAACATTCTGAATGGAACATATACTGTACCATTAATTCCAAATGCAGCCCAAATTGTTCGGACCATGCTTCGTGGCACTTTCGGATCAGATTTCATTCCGAATATGAAATGTTTGGAGAATGGGGATTACGCACCCATGCAGTGCAACGTGAACATCTATAGCATGAATACCACAGCTTGTTACTGCATGAACAGTGAGGGGATGCAGTTAACACAACGTGTTCCTGATCCCATGGGTTATCCCGCTTGTACAGGCCCCTCTGTGTCACCGGTCGCCCAGGCTCTGTGTGGGGCTGCATACTCTGATGCTATTTGTCTCAATGGAGGATCCTGTGTCGGTGACCTCATGGGGTCACACCCCCGCCTCTGTCACTGTCGGGAAGGGTTCACCGGGGTTGTGTGTCAGCGCAGGCTAGAGAGCAATGAGCAACCAGGTATGGAAAGTTAA

Transcript

ctg1429-1.7-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00095	WAP	WAP-type (Whey Acidic Protein) 'four-disulfide core'	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000716	Domain	Thyroglobulin type-1	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR003645	Domain	Follistatin-like, N-terminal	Interproscan
IPR006150	Repeat	Cysteine-rich repeat	Interproscan
IPR008197	Domain	WAP-type 'four-disulfide core' domain	Interproscan
IPR036645	Homologous_superfamily	Elafin-like superfamily	Interproscan
IPR036857	Homologous_superfamily	Thyroglobulin type-1 superfamily	Interproscan
IPR050906	Family	Notch signaling pathway	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005112	Molecular Function	Notch binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0030414	Molecular Function	peptidase inhibitor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1429-1.7-1 global RNA-seq network