| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg14-5.5-1 | STRAWBERRY NOTCH-RELATED | chr3 | 45143777 | 45184276 | + |
| CDS | |||||
| ctg14-5.5-1 | |||||
| Transcript |
| ctg14-5.5-1 |
| Protein |
| ctg14-5.5-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13871 | Helicase_C_4 | C-terminal domain on Strawberry notch homologue | Domain | Interproscan |
| PF13872 | AAA_34 | P-loop containing NTP hydrolase pore-1 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR026741 | Family | Protein strawberry notch | Interproscan |
| IPR026937 | Domain | Strawberry notch, helicase C domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR039187 | Domain | Strawberry notch, AAA domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12706 | STRAWBERRY NOTCH-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0031490 | Molecular Function | chromatin DNA binding | Interproscan |
| GO:0042393 | Molecular Function | histone binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg14-5.5-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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