Gene detail

Detailed information of ctg1393-1.10-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1393-1.10-1	-	chr7	16732796	16735162	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1393-1.10-1

ATGAGCAAAGGGAAGAAAGACGAAGCGCCGCCGCCGTCGGTGGGACCCGGCAGCAAGATTATAGCACTGGCCCCGACCCTTCGAAAACTAATTCTCAGAGAAGAGAGTGACGTCATCCTCAATTTCTCCACGATGGGCATGAAACTGATCCCCCCGGAGATCTTCAGAAACGAGGAGATCATGATAAACGCGAAGCGATTTCAGGCAGAAAATAACCGGCTGAAGAAATTTCCAAAAAATATATCCGATTTCGGCAATCTAATATTGTTGGATGTGAGAAACAACCTTCTTTCTGCTCTGCCTGGCACAATATCCAAGATGAAATTCCTGGAAAAGATCGAAGCGTCGAATAACACTCTGAAAAGTCTACCCAACACAATTAACAAAGCACCGGTTCTGGCCTACGTCGATGTCTCCAACAACCGCATAAAATCCTTGCCAAAGACGATCAATAAATGTCCATCGTTGGTCCACCTCGATGTATCCAACAATCTAATAAAATCTCTCAAGAAGAATATATACGAGCTTGGTGCAACGGTTATTCTATCTCATAACAAACTGACGGAGCTCCCAGAGGCGACGATAAAATCTTCATCGCTAAAATCTCTGGATGTTTCGCACAATCAAATCGCCTATATCCCAGATAACATCAACAATGTGACGACACTAACCAGTTTGGACCTCTCCTTCAATGAACTACGTGAGTTACCGAGTGAGTTGGGCTTCCTCAAGTATCTACACACCCTGGACGTCTCTCACAACGAGATCGTTTCTTTTCCAGAAGAGATCTGCGCCCTCCAGTTCTGCTTGGTGACTTTTCTAGCGTCTGACAACAAAATCAAAACCTTACCGAAAGACGTAAGCAAGATGCATGTTCTAAAAACTTTAAACATAGCGAACAATGAAATAGAAATCCTTCCTCCGGATTTTCACAATATGAAATCTTTAACCAACCTTGACCTTTCCGGTAACAAGTTCACGTCTGCCGACAAGATAAGTCGTCTGCGAAACCTCGAAACGCTCTCCGTTGCTCGAAATGCTCTGACGACACTGCCCGATGAAATGGATCAGATGAAGTCGTTGGTGTCTATCGACATATCAGGAAACCACATCAAGGAACTGCCAAAGTCTCTGAACAGGATTACGACGTTGAAGACGATAATTGCGGCAGACAACAATCTGTCCGTGATTCCGGACACCCTGGGTGAGCATCAGCTGCTGACGTGCATCGACGTCGCACAGAACCGAGTGACTGGCTTCCCACAGGATCTGCGACGACTGAGGACGATAGAGACGCTGCGACTGGGACACAACCAACTGGCATCCTTGCCCAAGGTTCTGGAAACCCTGGAGTTCCTCACGGAGCTAGACGTCAGTGGCAACAACCTCACCGACATGATCTTACCGAGGACCATTACCTCGCTTAGCGTTGCCGGAAATCCTCTCTTCCTCCCGTCTCAGGATCCCAAGTCGTTACTGAACGCACTCGGCGAGAGAGAGTTCGCGAACAAAATTACATTCCTCGATATTTCCAGTATCCGACTGGACAAGGTTCCGCCGTCTGTCTGCAGCATGAAGATGCTGACGGTTCTCAAGATGGCGCACAACCAGCTGAAGAGGCTGCCGGACGATCTCTGTAAGCTGCGCATGCTCAGGGATCTGGACGTGAGCGACAACGAGCTGCTGACGATCCCCCAAGACATCCACTTTATGATGAACCTGCGACGCCTGGACGCGTCTCAGAACCGAATCGGCGAGTTCATCGACGGCCTCAAGTTCATGCACCAGCTGGAGGAGCTGAACCTGTCGTTCAACAACATCGACACTCTGCCCATCCACTTCGGCGAGCTGAACAAGCTGCTGCACCTGGACCTGTCCAACAACGAGCTGGCCCAGCTGCCGGAGGAGAACATTGACATCCTGGCGTCGCTGCTCACTCTGAACGTGTCCAAGAACCACATCAACGCCATCCCGGCAGACATGCCCTACCTCTACCGCATCAAGGTCCTCAACGCGGCTTCCAACGACCTGACCTCCATCCCGCACGACATCGCCAAGATGCAGTCTATGGAAGTCCTGAACTTGGCCGACAATCTGCTGGAATCCCTGCCGGAGGGAATCTGCAAGCTGCCGGCTCTCGTGGAACTGGACGTGTCCGACAACAAGATCCGAGGATTCCCGTCCAAGATGGACCAGCTGCGTGGACGCTGTAAAGTGAACATTGACAAGCAGTCGAGCTACAAGACGCGCGATCTAGAAGAAGGAGGGTTAGCCCCTGGGGAGGTGCAGACGGACAGTCCTGATGCCAGCCCCACCCCTTCCAGATCAAAAACGCCCACCACGAAGATGGAAGAGAATGATTACTGA

Transcript

ctg1393-1.10-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12799	LRR_4	Leucine Rich repeats (2 copies)	Repeat	Interproscan
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR025875	Repeat	Leucine rich repeat 4	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR050216	Family	Leucine-rich repeat domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48051	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1393-1.10-1 global RNA-seq network