| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg1312-1.11-1 | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | chr15 | 30606882 | 30613393 | + |
| CDS | |||||
| ctg1312-1.11-1 | |||||
| Transcript |
| ctg1312-1.11-1 |
| Protein |
| ctg1312-1.11-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF01287 | eIF-5a | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | Domain | Interproscan |
| PF21485 | IF5A-like_N | Translation initiation factor 5A-like, N-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR001884 | Family | Translation elongation factor IF5A-like | Interproscan |
| IPR008991 | Homologous_superfamily | Translation protein SH3-like domain superfamily | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR014722 | Homologous_superfamily | Large ribosomal subunit protein uL2, domain 2 | Interproscan |
| IPR020189 | Domain | Translation elongation factor, IF5A C-terminal | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR048670 | Domain | Translation initiation factor 5A-like, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11673 | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003746 | Molecular Function | translation elongation factor activity | Interproscan |
| GO:0006414 | Biological Process | translational elongation | Interproscan |
| GO:0043022 | Molecular Function | ribosome binding | Interproscan |
| GO:0045901 | Biological Process | positive regulation of translational elongation | Interproscan |
| GO:0045905 | Biological Process | positive regulation of translational termination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg1312-1.11-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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