Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
ctg1287-0.8-1 | ATP-DEPENDENT RNA HELICASE | chr4 | 3524824 | 3536683 | - |
CDS | |||||
ctg1287-0.8-1 | |||||
Transcript |
ctg1287-0.8-1 |
Protein |
ctg1287-0.8-1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR002464 | Conserved_site | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | Interproscan |
IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR18934 | ATP-DEPENDENT RNA HELICASE | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0003725 | Molecular Function | double-stranded RNA binding | Interproscan |
GO:0004386 | Molecular Function | helicase activity | Interproscan |
GO:0005524 | Molecular Function | ATP binding | Interproscan |
GO:0005622 | Cellular Component | intracellular anatomical structure | Interproscan |
GO:0005730 | Cellular Component | nucleolus | Interproscan |
GO:0045943 | Biological Process | positive regulation of transcription by RNA polymerase I | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for ctg1287-0.8-1 global RNA-seq network |