Gene detail

Detailed information of ctg1225-1.9-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1225-1.9-1	COILED-COIL DOMAIN-CONTAINING PROTEIN 180	chr2	49840818	49888177	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1225-1.9-1

ATTTCTCTTTACGTAGTCAGATTGCCTGCCTGGTGACTGTTGCCGAGTTTTATCTTACTGTCGTGTTTCACAGAGTACTACCTCCATGTTTCCGACACGTTTATATACATGTAGGTGTTGACCCCACACTTGTACCTGCATAGTACGAGTGTATGTACAGCTTCCATTCGATCAAGAATGTCGCCGGATGAAAGCATTGTCATTGGCAAGACAGCTATGGTGTTTGGAGATTTCGAAAACGACACCACGTTCAATATCAGTGATGATTCGTGTCTTCCTGGTTTTGACTTTCATCAATTCACGCACTACTCTGTTATTCCTGCAACTCTAATAATTGGAATGCTCGCCTTTCTTGAACATCGACGATCACATGTCGATATCTGTGGAGGGAGACCTGCTCTCATCGTGCCACTGCATTTCCTGGATGGCTATGAAGATCGGTTCGGGTATGCTGCCGGGTTTGGCGCCATCACTAACCTCATCATCAGTTTATTCACTAACGCCAACGTTTACCCATTCTCCGTGCCGATATGGGCGGCAGCTCTGCTCATTCAGCTGAGTGCTCTAGAGTACAGCGTCATATGTTTCCCGCTGTTTGCATGTATAGCTACACGACACAAGCTGGTCGGAGCCATCACGTTATTTCTGTACAGTACACTGTGGTTTCTGGCGACCGTTGTGTATCGACTGCAAGTTGAGTGTCAGTATTCTGTTCAAGGAGCTAACAAGGGATACAAAGTACAGCTAATACTGTCTCAGGCACCAATTTTTTTCTGTTATGCTTACCTGATGCTGCGATCCATTCACTCGATATACATGTGTTTCCACAAACAGAAATATGTGCTGGAGGAAAACACAGATGTTATTCACCCTCACCAAGCACTGTATGTAAGAGTGCTACTCGATGCCAAGAACTACAGCTCTGACACCACTAAACCGGATGAGATCTGGTATAAGAGATGGTACCGCAAGATACATAAGCCGGTTTGTGGATTTAAATATCCTGTGAGAATTGTGGCTACCGTCTTCGTCGTTATCTCAATTTCATATCAGTTCATAGCTTATCTTTTAATGCTGGGTTTCCAAGCTCTGTATTATGTGGCTAAAATGGACGACAAATCGAGTCTGCACATGACGGTTTTGAACGGCACATTAACCGTCTTGAATCCCACCATTGTCAACGTCTTTATAGGTAAACTGTGTGTTTTCAACGGCACATTAACCATCTTGAATGTCACCATTGTCAAAGTGTTTATAGGTGTGTACTTCCTCTCTCTCCTCCTTGTTACGCTGATGGCGTGTACAAATATGTACCTGTTTCTAACAACCTACAGATTAGATATTTTAAACATGTTCAAAGGCGTGCACTCGTTTGCAGTCGACAAGACAAAACCAACATACTTCATTATGGCTGAAAACCTTCGATTTCCGGGATACCAGGTAGCCTATATGTTGTGGGGTATGATCATTCTGATGATCGTAGTGATGATCCTGGGTTTCGGTTTGTCGTACGTCATTTTCCTCCTGGCTGTTAACAACATACTGGTCGACGCTTTGAGCTACTTGGCCCAGGTGTTAAGTGTCCCGGCAACCATGATACTTCTGTTCTATTTACAAGTCCTAGTCTCCAGATTTCTCTTACTGCAGCCAAAAGTAAAAGATACAGACACCGCTCCTCCCTTGAATGTTAACAACAGAAAGTTTTACGAAGACTTCAACTATTATGCGTTCTTTGGAAATCTGGGTATCGGGGTTGTGTCGTGTTTCTTCCGCATCCTACAGGGCAGTGTGCTGGGCGTGCTCCTCGTGGGACGTCTCGAGAGAACCATCTTCATGGCAGGCTGGGAGCACAGGGACAAAGGTTACCAAGCATACATCGGCATGTTACGAATGGAGAACGCTCACAATCATCCTATCCTGAGGGTGTTCAGTGGGCTGATGTGGGAGGTGGCCTTCAAGAAACGCCACCTAGCGGCAGCTACTCAGGATAATCAGGGTACAAGTAGGAAATACAGAACATTCCCCAGCATCGAATCCACCGCACCATCCTCCCGAAACCTGCATTCTCTAGCTGATGATTCAAGTTCCCTGTGCTCATTTGAAAATGTACCAGTTTCAAGAAACAATATTCACCGCAGACGATGGTGGGTTGCCTACACACTGATAAACAATCCGGACTTGTGCCAGAAGAGAAAAAAGTGGCTTTTCGAAATTCCAACAGACGGATTTGAATTTGGTGCTGGAGACGAATCAGTGAGAAATAGAGGGAGCCGCAACGAAGCCTATGTGTGAATCACTTAAAGCTGCAGTGTTGACTTTATATCACTTAAAGCTGCAGTGTTGACTTTATATCACTTAAAGCTGCAGTGTTGACTTCAAATCACTTGAAGCTGCAGTGTTGACTTTAAATCACTTAAAGCTGCAGTGTTGACTTTAAATCACTTAAAGCTGCAGTGTTGACTTTAAATCACTTGAAGCTGCAGTGTTGACTTTAAATCACTTGAAGCTGCAGTGTTGACTTTAAAT

Transcript

ctg1225-1.9-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14752	RBP_receptor	Retinol binding protein receptor	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026612	Family	Receptor for retinol uptake STRA6-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21444	COILED-COIL DOMAIN-CONTAINING PROTEIN 180	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0034632	Molecular Function	retinol transmembrane transporter activity	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:0071939	Biological Process	vitamin A import into cell	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1225-1.9-1 global RNA-seq network