Gene detail

Detailed information of ctg1211-0.1-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1211-0.1-1	ATAXIN-7-LIKE PROTEIN 3	chr11	28377858	28466739	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1211-0.1-1

ATGGATGAGTTGAAGGAAGCTTGTTCGGTCAAATTAAAAACTGCTAGACAATACTACATTCTAGGACGGTACGAAATACTCCAATGTGGTGATATGAAGTTAATTCGCAAGCGTGCCAACTTGGCAGAGGAACCAATATACTTTGTGAACATTGATGAAATGTATGACATCATTAAGTGTGCTTACATTTCAACTGGACATGATGGTCGCGACAAAATGGTTAAGTTTTTGTCTAGATATGCAATCATTACGAGGGAAAGCATTGAACTATTCAAGTCTCTTTGCATTGAGTGCCAAAAGAAACGAAGACGTGCTACGACAAAAGGGATTACCGTGAGACCGATATTATCAAAGAATTTTGGATCACGAGGGAAAGTGGATCTAATTGATATGCAATCCATGACAAAGGCACCACACAAGTGGATCATGGTCTATCAAGACCATTTGACAAAATACTGTGTCCTGCGCCCACTAACATCTAAACATGCAGTAGAAGTAGCCTTTCAGTTGATGGACATATTTCTTCTCCTCGGTGCCCCTCAGATTCTACAGAGTGATAATGGCAGCGAATTTACAGCATCTGTCATCACAGAACTCAAGGTTCTGTGGCCCGATCTCCTCATGGTTCACGGCAAGCCTCGACACCCTCAGAGTCAAGGATCCGTTGAACGGCTGAACTGTGATGTGAAAGATATGTTGATTGCATGGCTCGGTGATAACAACTCAACAGACTGCCTATGGGATTGCGATTTGTTCAATTCCAGAAAAATTGTAGTTATCATTCTGGCATCAAGCAGACACCATACAGGGCCTTATTCGGTACTGATGCACGAATTGGATTGCGTACCTCTGTCTTACAAACTGACATTTTGGAACGCATGGTGTCTGAAGAGGATCTCATTGCAGCATATGCTACAACAGACAGTTCATCAAACATGGATGCTTCAGAATCTGATGGATCTGAGCAGGACACAGTCAACGTCACCAATGATGTTCCCGAATCCTTGTCAGGAAAGCCGTTGTGAGACGTGCTGTGTGAGGCCTGGCGTTGTCATGTTGGAACACTGCGTTGGCGTTGGCCATAACTGGAACGATGTGTGGCCGGAGGATCTGGTCAATGTAGCCCTGTGCATTCAGGTTGCCCTGCACGTGGACCAGAAAGAGGTGATGATGGAGCTTATAGACGAAGTCACACTGGGCCTGTGTTTTGAAGTCCACCGATCGGCGCGGATTGGAACCCTGTTTCTAGGAGACTCTGATCCGGTGTCAGAAAAAAATCATGAAGTGATAACTCGGCCAGGAGTGGATGTGTTTGGTCAGGTTCCAACGAAAAAACAGTTTGAGTGTGTCTGTCCACACTGCCAGCGCCACCTGGCGGCATCCCGGTTTGCCCCACATCTCGAGAAGTGTATGGGCATGGGACGAAACAGTTCACGTATAGCCAGTCGAAGAATAGCCCACAACACAAAGCGGGACAGCGACGACAGCGCGGCAGAAGATGACAATGACAATGAGTGGACACTTGTGGCTGATAAAAAAGGAAAGAAATTGAAGAAGGACAAGGGGTTGATAGTCAACTCTCCGAGAAGAAGTAAAACTGGACGATTTATCAGTAAAGTTGAGGATCGAAGTGATACCCCAACGAACGAGAGGTCATCCACCCCAGATTCTAGTACTTTGAGTTATGAGTATATGACAATAGAGGACAGAAAAGCTTTGTTATTACACACTTGTGGGGTTATATCTGAGAAGACAAGCAAGATGTGTACACGGTCGGTGCGGTGTCCTCAGCACACTGATGAACAGAGACGTCAAGTGAGAATCACACTCCTCAGATCAGCCAGGTCGGTGCGGTGTCCTCAGCACACTGATGAACAGAGACGTCAAGTGAGAATCACACTCCTCAGATCAGCCAGTGGTACTGGAGATGCAGAAGATATTCATGTCGACATCGACAGCTATGATGATGCGGAGAATCAGTCGCTACGGGAAACGCTTCAGTGGGAAGCTTCTTCCAATTCTTCCCCCGCCGATTCCAACTCCACCAATAACAATAGGAGACAACCGAGCACAGCCCTTGATATGCCAGTCGCGGGGCACAGGTTGGGACAGGAAAACCTCAGATGGGTCAACCGAGGAGTACCACTCCAGCCCAACTGGTATCAAGCAGAGAAACAATGCGCTAATAAACACTCTCGTTTGCCAAAACTTGACGACATCAAAATCAGTGACATTGAACGCATTTTTGGCAAGGACCGCAAAATCTGGCTAGGAGGAAAATTTGTCAATACACAGTGGAAATGGATTGATGACGGCCCCCTTTACGATCACGTGGGCTGTTTTGATATTCCCCTCGACCAATTGACGCCAAGGAATGAAGCGTGTCTGGAGGTTGTCGACTGTTTCAGAGTTTGTAAAACTCCATACATCGCATTACAGACGAATCACTGCTATTGTTTCTCTAACATAAGTGGATACCAAAATCGATCTTCTAGTGACTGTCATTATCACTGCTGGAACAACTTCGAGGAGTCATGTGGTGGTTTGTCGGCGTTGAGTGTGTATCATGGAGGTAAAACATGTCAACCTCAAAGAGTGGACATATACCTGACATGGGAGAAGGCGAAACATTTCCACAACTTCTCTGTAGCACGTGTGACAAGGGCAGACAACCCACCATTTCATGCTGGTGTACATGGACCCCAGTATTACTGGATTGGCCTTCACAAACATCACTCCCTTTGGAAATGGACAGATAATTCAAGAGTGATTCAAACCAGTTTCAATGGTAGTCAAGACAGCAATGTCACAAAATGCTTAGCTGGCCTGCGTGGAACAAATGGCAATGTCGTTATGATGTCACTTCCGTGTAGCACTAATCTGCAATCCGTCTGCATTTCTGATACGACACCAGTCTTGACTTTGTATCCGAGTACCAAGGTCAGCAAAACCACCACCGCTTCTGTTCCAAAAATGACAACCACAAATGCCTCTGTTGTGACAAGGGAGACAACTACTGTATCAACAAGGGAGATAACTCAGATGCCAACTAAAGACAATGCAAAGTCTTCAGCTGATAATGCCCACACGGATGTGACGTCAGCAACATCCTACACCATTTTAACAGCAAAGCTCCCTCAAGAAAAGAGTACTGATGAGTATCGAGACCTGTATATTGCACTTGCTGTAATAGGAGGACTGGCGTTGATTGCCATCTGTGTTATTACGACTGTCTGCATTATACGACGCAAAAGAAGACAAAACCGGACAATGCTGTACAATGTCAATGTGCCCGTGAGCGACATCAGTGACGCGTGGACCAACAACAGCCAGCTCATCATCATGGACAACAGCATCTACGGCAAAACTCAGAAACGCGTGCGGATTCGCTCACTGCGAGACTTGATATACAGCTCACAAGGCAAGACGTCTTCTCTACACAGTCTGGTTCAAAGTGGAGACAACTCCGAACGACAGATGAATGGAGCTGCTTCGCAGAGCCTGAGAGCGTCGTCCGGGTTACCGGATCCTGTACGTCCATTTCCGTTTGAACCGGAAAAGCGTGGAGACAAATGA

Transcript

ctg1211-0.1-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08209	Sgf11	Sgf11 (transcriptional regulation protein)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR002889	Domain	Carbohydrate-binding WSC	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR013243	Domain	SCA7 domain	Interproscan
IPR013246	Family	SAGA complex, Sgf11 subunit	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR051078	Family	SAGA-associated factor 11	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46367	ATAXIN-7-LIKE PROTEIN 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000124	Cellular Component	SAGA complex	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0016578	Biological Process	obsolete histone deubiquitination	Interproscan
GO:0045893	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0071819	Cellular Component	DUBm complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1211-0.1-1 global RNA-seq network