Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
ctg1189-0.17-1 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 | chr3 | 29787694 | 29788722 | - |
CDS | |||||
ctg1189-0.17-1 | |||||
Transcript |
ctg1189-0.17-1 |
Protein |
ctg1189-0.17-1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF02456 | Adeno_IVa2 | Adenovirus IVa2 protein | Domain | Interproscan |
PF02862 | DDHD | DDHD domain | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR003389 | Family | Adenovirus packaging protein 1 | Interproscan |
IPR004177 | Domain | DDHD domain | Interproscan |
IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR051644 | Family | TRAMP complex component and AT-rich DNA-binding protein | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR46543 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0019073 | Biological Process | viral DNA genome packaging | Interproscan |
GO:0031499 | Cellular Component | TRAMP complex | Interproscan |
GO:0043629 | Biological Process | obsolete ncRNA polyadenylation | Interproscan |
GO:0046872 | Molecular Function | metal ion binding | Interproscan |
GO:0071031 | Biological Process | nuclear mRNA surveillance of mRNA 3'-end processing | Interproscan |
GO:0071035 | Biological Process | nuclear polyadenylation-dependent rRNA catabolic process | Interproscan |
GO:0071036 | Biological Process | nuclear polyadenylation-dependent snoRNA catabolic process | Interproscan |
GO:0071037 | Biological Process | nuclear polyadenylation-dependent snRNA catabolic process | Interproscan |
GO:0071038 | Biological Process | TRAMP-dependent tRNA surveillance pathway | Interproscan |
GO:0071039 | Biological Process | nuclear polyadenylation-dependent CUT catabolic process | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for ctg1189-0.17-1 global RNA-seq network |