Gene detail

Detailed information of ctg1186-2.10-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1186-2.10-1	GLUTAMATE--TRNA LIGASE	chr1	4466301	4500180	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1186-2.10-1

ATGTTGGAACACTGCATTGGCGTTGGCCATAACTGGAACGATGTGTGGCCGGAGGATCTGGTCAATGTAGCCCTGTGCATTCAGGTTGCCCTGCACGTGGACCAGACTCGTCTTGTTCCGGGAGCAATGGACAAATTGGAAGGCATTCTTTCTTGGACTGGACTTGTACCCGATGAAGGTCCAAGGCAAGGTGGCAGTTATGGTCCATATATACAATCTCAAAGGTTAGCCATCTATCAAGAAAATATCCAAAAGCTACTTCAGAATAAGACGGCCTACCCATGTTTCTGTACACCGAAGCGACTGGAACTTCTGAGAAGAGATGCCGTGAGACGAGGCGAGACGCCTAAATATGACAACAGATGTAGGCATTTGACCAGTGACGAGGTTACAGAGAGACTGGAGAAGAAACTTCTACACGTTGTCAGATTTAAACTGGAGCACACCACTGATACCTGGGAAGACTTGGTGAAGGGGCCGAGTTCTCACGACGTAGCCAACATCGAAGGCGACCCAGTTTTAATGAAATCTGATGGATTCCCAACATACCACTTTGCCAATGTCGTTGACGATCATCTGATGAAAGTTACGCACGTCCTACGAGGAGATGAATGGCAGCCGTCGACAATGAAACACATTCTGTTGTATAGAGCCTTCGACTGGTCACCACCTCACTTCGCACATCTCCCGCTTATTGTCAACAAAGATGGAACCAAACTTTCCAAAAGACAGGGAGATTTACATGTTGAGAACATCAAGAACAGAGGCTACTTCCCTGAGGCAGTTTTAAACCTGGTGACAAAGATTGGAGGTGGATTCGACATGGACGGTACGAATGGAATGGGTCTCGATGAACTCACTCAAAAGTTTTCTATTGAAAAAGTCAAAAGCAGTCACGGTCGACTGGATATGCAAACTCTGGATGATGCTAACTTAGAACACCTGAGGATTAAAGTCAATGGAGCAGAGAGAAGCCTAATCATAGACCAGCTTCGGGAACTGGTGTCAACTGCTTATTCAGAAAGACTGGGCGATGCTTCCATTACAGATCACATTCTCAGTTCTCAGTACATTGGCTCTATACTAGACTGGGCTGTGTCGGAAAAAAGGATCATAAAGACTAACGATCTACTGGATTCTAAGTTCAGCTTCCTGTGGACAACCCCTCAAGAGCAGGACATAGCAGACTTAAAGAACTCCCCAGTCTCGGTTCCCGACCTGCTGCACGGCTGTATCACCACACTGGACACAGTGAGAGACTTTGATATCGGTCACGTGACTCAGTCTCTGCGGTCTCTGATCAAGGATGAGAAGTTAAAAATGAACACCTGTATGCACTGTTTGAGGAAGTCCCTCAGTGGCTTGCAGCAAGGCCCTCCAGTTGCAGAAATGATGACAATTATTGGCAAAAAAAACACAATACAGAGACTAAAACACACAATGGACGTTCTGACAAAATCCTAGCAGTTTCTTTGCAAACAACTTCTGCAAGCAACAAAATGAATGAATGAAGTGTAAATAAAGCTTATTTACTATTGGACTGCACAAGAGATGAAACAGACTGGAAGTTTTTTTTTCCCAGAAATCTCAAAGAAATTTATTAGGGTTATTGTGAGCTCTTCAAAAAAAAGAACAAAGTTGTGGCACACTTTATAAGAACTTGAAGAAAAACAAACAGAAATCTGATGTCAATGGTTTTCTTTAGTTTATTGCGTAATACTATTCAATAAATTTAATGACACAGTTAATATACATTTTATAACAGAAATAATCAGGTATGCATCAATAAAGATTTTATCATAAATACATGTATAAAGAATACCACTAGGGTAAGTGCTAAAAATAGCACAATGCACAACTTACCTATTGTATAGCACAACTTACCTATTGTAGCTCATACAAGACCACTAGACTGATACGAACAACATACAGTGAAACAATCTTGAACCGTTTTAGAGTTATGCCCTGGAAACGGTTAATCATTCTGGCTATTTGTTTCCAAGGTAACAGAATTTAAAATATATATCGAAACCTAGCAGCAAAAGACACTACTAGACCACTAGGCCGATATGTGTATAAACAAAATTAAATTTATCTCAATGTTTTGGAGTTAAATTGGCATCTCTCTCAGTTAGTCCAGATCCCACATGAAGTGAAAATGAATCTAAATCAGTGACATTTCTATCATACATAAGAAAGAAATAATGTTGCATATTGATTACAAAATGTTTTCAACTGCCGACTCTTTTTGGTTTTGTTTGAATACCCATTGGTGAGAACATCCTTCATTACATATGATAACACGTATACGTGTGATAACAATTTAAAGGCATACAACTGGCTACTTCTAGGTGATGACTAGGGGCCTAATTCACTAAACTCTCGTAACTTTGTGATCTCACAGTTCAGTGCTAAAAGACTTGCAAAGAGGATGCTTTGTTGTCTAACAGAACCTAAGAGAGCTTTATGAATTAGGCCCCAGATCTCCAATGTAATACCATCCAACAATAAAAAGCATATTGAAATTGATTACAATGGTGAAATACAGTTAACCTGTGATGTGTAAGTTAGTTACAAGTGCTAGGACCATAAATATGTTTTTTAGGATATGTAAGAAATAGAATACTCCAGTACATTCATGTCCATTAGATATCATTCATCTTGAAAGTTGTTGTTTAAAAACTTAAACTTGCTTTTGCAATTTAAGATACATTTTAAAACAACTTGTAAGATAAATGGTATCTAACAACAACTCATGTAGTATTCTCTATATATCTTGTGTCTCAAAACTAATTACCTATAATTTGAGGTGGCATCAAGATCTGCATTGAGCCAGACTGGATTGTTGATGGCAAAACACACTTGAGAAATACAATGAAAAATACCTACTAAATAGTTCTTCTTTGAACACATGAATACTTTTCAATTTAATGCTAGATATTCAAGATTACTTTGAATACATTCATTACGACTAAAAACACATTTTAAATAATAAAAACAGTATCATTATATAATAAAAACACACATGTACATGTATTAACTATTATGTATAGATCAACAAGGTGAAATAAAACAACCAATATGCACTGCAAAAGAGCATTAAAGGGACACACCCTAGTTAAGGCTAATTAACCATTACGCTATTAAACCCATTTTTTCACAAATAAAATTGCACTTTACTTACCGTTTATTATTAAGAATATACATTTCCATTCACCTTAAGTGTTTTTTTGGTAATCCTTGTTTTTGTAATACCACAAAATGCATTTTTCTTATTTCTTAAAAATGCACACGTTTGAGAAAAAAACGTTGAGCAGACAAGGTCTAATCTATTTTTAGACGGGATATTTCCATTTCAATGTCACAGACGTTGGTATACCACGTGACCGTTTTTGGTTCGGTTGGTTTTCTCGTGTACGGTTCGTGCAATCAACATCTGATTTGTTGTTGTTCATTTGTGAGATTTTTCTTCACAGTTCATGAACATTTTCAGTAACAATAAAGTTCAGACAAGTAAGTGTCTCAATACAAAACGTCACAAACCCATAATTTTGCTAAGTCTTATGATATCTGGAGAGGGGATACAACCAGGACAGAACAGCTGGAACATGTCCAGGTGATGGTGAAAGGAATGCACCCCAAGTCTGTGAAATTTGTCGTGACGTAGGCATTGTAGGCATTGTTGTGCTTCGAGCGACATCTACCGGTGACATCAGAATACTAACTTTCAAAATTATTTCAAGCAATTGGGACATGGGGATTCCCATGGTATTTATCGATATAAAACCTGCTTTTTCACTCCATTTGATAAAAACGTGATCTAAGTGTGTTACAGGTTTGTAGATTAACCAAATTATAATTTATTTTCGCTGGATGGAACTAGGGTGTGCGGCTTTAAAAGAATACAATATTTGAATGAAGTTATACAATAAAACCAGACCATTAAAACATTGGGGCCGTGTGCAATGAAGTCATCGGTTATGCACTTACGGTGATCTTATCTCCAAGATCGCGTTATGGAATGGGGCCCTGGGGCCTAATTAACAACGGTCTCTTAGGCTCTGTTAGACAACAAAGCATCCTCTTTAGAAGTCTTTTAGCATTGCACTGCAAGATCGCAAAGTTGCAAGAGTTTAGTGAATTAGGCCCCTGGTCCATAGGAACTGTGTACTCCCATTTGAGGGTGTAAATGTATCGGGGTTTTGGCCCTACTTAGCATAAATAAAGTTTAAAATGTGGCTTGTACCCTCCCACTAGATACTTTGACCCTCTCACTAGAGATTGTGCTCTGTGGGACTTAACAAATCAATGTATCTGCACTTATTTTCAAACAATATTAAACGGATCATTAAAGGGCAGAATTGTTCTGAAAATAAGTGATTTAGGAATAGGCAAAATACTGTATTAAGGTATCTTCCAGCAGGCTACAATTAGATCAACATGACATAAACTTGGTAAAACAAGAATTAGACATCTTAATAGGAGGGGGCGAGACATAACCCAGTGGTAAAGCACTCGCTTGATGTGCGGTCGGTTTGGGATCGATCCCCATTGGGCTATTTCTCTCTCCAGCCAGTGCACCACAACTGGTACATCAAAGGCCGTGGTATGTGCTATCCTGTCTATGGGATGGTATATATAAAAGATCCCTTTCTGCTAATCGAAAAAGAGTGGCCCATGAAGTGGCGACAGCAGGTTTCCTCCCTCAATATGTGTGTTCCTTAACCATATGTCCAACACCATATAACTGTAAATAAAATGTGTTGAGTGCGTCGTTAAAGAAACCAATCCCTTCCTTCTTAATAGGACATGTAGTACATGAAGAATATCACATATGCGTAGATTTAGCACCCCTAATATATTCAGATAGACCCAGAACATTTTCAGCCTTTGAAATTCAATGTTTTAAAATAAAATAAAATTTTGAGCATTTTTTTCTGTTCATTAATACCACATGTGATCTCTCACCACATATAATTCCCCCATTTCACCCCACAAATACAGGATGCATTGGATTATACAGAGCAAAGAAAAGACATCTGAACCATAGAAACGAAGGAGAAAGAAGGACAATTTAATAACGTAACTGGATGAAGAGATGTTCGACACAGTGGAAAAAATGTTACAGAGATACAAGCTTCTGTCATACTCATTTACAAAACGAGTGTCTGGATTCTGAGCGAGACCGAGTGTATTACATTAATCCTGACACAAGTTTTGGAAAATCTGTACGATTCACCAGCGAGTGTAATAATTTCTTTATTATCCGTAGTATTATTTTTTTATGAATAGGCCAACAAGGACCATGTCAAAACGTTTCAAACGTAACTAGGAGGAGACAATGAAATGATGTTGGTTAAGACTGGGGAAGCCACATCATGATATGATGTCGCCTCCCAAAATTACGTCATTTCTTGGTCACGTAAAATCGTTACGGCATACTGTATGTTGTACTTGTTATATTTCCCTGCATACCTTAAACTATGTGGATAAATAAAACAAAT

Transcript

ctg1186-2.10-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00749	tRNA-synt_1c	tRNA synthetases class I (E and Q), catalytic domain	Domain	Interproscan
PF19269	Anticodon_2	Anticodon binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004527	Family	Glutamate-tRNA ligase, bacterial/mitochondrial	Interproscan
IPR008925	Homologous_superfamily	Aminoacyl-tRNA synthetase, class I, anticodon-binding superfamily	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR020058	Domain	Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain	Interproscan
IPR020751	Homologous_superfamily	Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2	Interproscan
IPR045462	Domain	Aminoacyl-tRNA synthetase, class I, anticodon-binding	Interproscan
IPR049940	Family	Glutamyl-Q tRNA(Asp) synthetase/Glutamate--tRNA ligase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43311	GLUTAMATE--TRNA LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0004818	Molecular Function	glutamate-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006424	Biological Process	glutamyl-tRNA aminoacylation	Interproscan
GO:0043039	Biological Process	tRNA aminoacylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1186-2.10-1 global RNA-seq network