Gene detail

Detailed information of ctg1054-2.31-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1054-2.31-1	PROTEIN SIDEKICK	chr5	27612208	27652175	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1054-2.31-1

AGACATCCCTCTCCCGACGACCCCCTCTCTGTACCCCCTCGTCCACCCAGGTGCCATGTTCACGGACTCGAAGAATCTGCCGTCAATGCCGAACAACCTGCGAGCTGTCCTCGTCTCCACGAGATTTGTGACGCTCTCCTGGCAGACCCCGGACCACACTGGGCCGTCCGGGATCATAGCGTATTCCGTCTTCTGGAGAGAGCGCGACTCGGAAAGGGAGCGTGTGACGAACACGACGACGACAGAGGCCAACATTCAGCACCTGAAGTCTGACACAGAGTACGTATTCCACGTGCGTGCTTACAACCGCTTCGGTCCTAGCACCAAGGACGCCACACTCACCGTGACCACCGACCAGGAAGTTCACGTCCCCAGTCCTCCCGTCAACCTGCGTGCTGTCCCGGTGTCGCCGACGGCGATCAAGGTCACGTGGGACGCGCCACAGCACAAGAAAGGCTACATCACGCACTACGTTCTGATCTACTATGAGGTGGGCTCCACTAACGAGGATGAAATCACCGTGCAAGGAACGGGCTTCACGCTGCAGAATCTGAAGATATTCCGCGAATACAGCTTCCGGGTTGTGGCCCACAATCAGAATGGACCCGGGATGAGCACGGAGGAGTTCGTGGCTCAGACGTTTTCATCGACGCCGAGCGCGACTCCGCAGAACTTTACGCTGGAGGTTTCCAGTGCAACAAGAATCATTGTGCGATGGGAGCCGCCGCCTCTTGACAAGCAGAACGGAATAATCACCGGATACAAGATCCGCTATAAGAAGAGTGGAACGAAGCAGGGCAAAACCGTCACCACCGACGGCAACCGCAACAACTACGCTCTCACAGATTTGCGTAAGGGTACGGAGTATCAAGTGAGAATTTCAGCCCTAACTGTGAATGGTTCGGGAATTACGACACCGTGGCAGTCGGCATCCACGTACAGAGATAACCTGTATGAGCACAACGTACCTCCTGCACCAGCTCGTCTGCAGGTGAAACCGAAAGCCAATTCCATCGTGGTCAACTGGGCCCCGCCTCCAACAGACGCCAAGATACTGGTGCGTGGCTACGTGCTGGGGTATGGCAGAGGAATACCAGACGTGTATCAGACCACCCTGGACGCCAATACACACGACTACACAATACAGAACCTACACACTGATATTCGAAACAGCAAAATCTATTTAGTATCAGAAGAGCCCGCCACTCCGATGATGCCCCCTATTGGCCTGAAAGCCATAGTTCTCTCTCCTTCGACCATAGTGCTCACATGGGCAGATAACTCTCTAGGCAAAAGCCAGAAGATAAACGACAATCGATACTACACTGTGCGCTACACGCCACTGCCGACCAACCGAGGTCGTGCACGATTCGTCAACAGCACCGACCTCAATGCCCACGTCGACGGTCTGAAACCCAACACACAGTACGAATTTGTTGTTATGGTTATCAAGGGCAGACGAGAGAGTACGTGGAGTATGAGCGTGATTAACACGACACAAGAGTCAGCTCCAGGTTCAGAACCACGTGACCTGACTCCGGTTCCCATGGAAAAAAATCCACTGGCTGTTACACTGAACTGGCAACCTCCCCAGAGACCAAACGGACTTATTACAGGCTATCTGATTTTCTACACGACTGACTCTAAGCAGGAGGACCGTGACTGGGTGGTGGAGGGGGTGGTGGGCGACCACCTGTCCACAGTGATCAGTGATCTGACGCCAGACACTACGTACTTCTTCAAAGTCCAGGCTCGCAACAGGAAGGGATATGGGCCCATGTCGAAGACTGTTATCTATAAGACACCTAAAGGTACCTCAGAAAATAATTTCTGCTTCATGTTTTTCTTCGTAGTAACGAAATCAGCATCCACAGAGTCGAGTGCACCGGGTGGTCTGTCTATGAACGTCATTATCATCATTGCTGCGGTGGGCGTAGGCGTCACATTCCTCATAGTCATTGTGGCAGTCATCGCCATCATCCTCGTGTGTAGACGGAGAGACGCACAAAGACAGGCAGCTTTGAGCTACAAGTCTCCAAACAAGCCCGTGAAAGGCATCCAGAAAGATGTCAAACCGCCCGACCTCTGGATTCACCAGCCAAATAACCTTGAACTTGACAAGATGAGTAAGTCTCACCGCAGCGAGTCGAACATGTCCGTGGCAACCAGCACGATGAGACGGTCATCACAAGGGTCATCTGACCGACTGGACGACCTCCCACCAGGAATGGACGCACTGGACAAGAGACGGAACTCTTTTGTGGGAGAGAGCGGGTACCCATCGAGTGGGGAGGAGCGATACCAGGCTCCACAACACAGAAGTATCATCCGTCCAAAACCAATCACCATCCCCGTCGATGCGCAGCCCGTGCATCGGGAACCCGTTGCGACAGTTACAGCTTTACCAAATGGTCACATTATGCAAATGATAGATCCGAGGGACGGCCTCCCCATGAGGCCGGTGTACCCCCGAACCCAGTACAACACGCAGTATACCTCCACACCGAGGGTCAACGCTGGAGATATACCTCAGTCTAGCTCAAACCCCCAGACCCCCGAGTCTCCGACACAGTTCCACCAGCAGTCAGGTCTGCCGTACGGGGAGCCCCAGTCTTGTGCATCCATCTCGGAGGCGTCTAAAGTCTATATCGGGAAAATCTCACAGACGGAAAGTCCCTTGAGGAGCTTTTCCATGCCTGGACCCCCCAGTCCTGTTCCTCCCGGAACCCCCACCCCCAAGCACATAGTTAAACCCCAGCAGAACCTCAGCCCTTACAAGAAGCCGACGCCCCCTGTGTCGAGTGGGCCAATCAAACCACGGACAGCAGTGCCAGTCGTTACGTCAAAAGCTCCAGATGTCACTTTGAAGTCCGGGAAGGAGGACCCAGGATTGGAGAAGTCGTTGAGCACGGAGGAGCTGACGGCCGAGATGGCCAACCTGGAGGGCCTCATGAAAGACCTGAACGCAATAACCCAGCAGGAGTTCGAGTGCTAGCCCGTCCGCCCGCCCCGCTCCGCTATTTATACTGTACATTGTGTATTTATGGACTTTTGTATTGCCGTGGAAACTGTATCCATAGCAGCCCAGGACTTCCATATATGGTGCAAACAAACGAAGATTTTTGTTGAAGAAAAAAAAACATTGTTTGATTCATCTCCATTTTTATGTTCATCTTAATGTGACATGAATGTATACATCTTCTTCCTTTTCTTGTCTTTTTTGTTTTAAATATGTTTTTTTGTTTTACTTTTTCTCATGTTTTTTTTTTAAGCATCTTGGTTAGGTAACAAATTCTATGTGTATTTTTTAAGACTGGAGATTGCAATATTATGCACTCGCTTTTGAGTACGTATTTTCATTTTAAGATTTGAACTTGTTGAATATAGCACACGTTTTACTCAGTTCAAATGTACAGCAAGGAGGCATGTACATAAACCAACAAAACCACAATGGTGACACCACTACCAACAGGAAATGAACTCTGGAGAATATTCAACAACCAATTTATCTACCAGTTCAGGAAATTATATACATGGAACAGTAATGGAAAATAAACCACTTTTAAAAGTGACTGAAAACTAATTAGTATTATCTGTGTTACAAAATGTTGACATCATTCTCAAACCAATTGGACCTGTTGATGACTGATGTGTGGTGTTGATATACAACGGCATTGTGTCTTTGTTTCCTGAATTAATGAAAGTAAGACTTTGCTTCTTGGAAACTAAATCATTGGTTTATTGACAGATGTGTGCAAAAGATTTTGGAACAAAGAAAGAAAAATAATCGAGGAAAACATCTGGATTACAATTTCTTCCCTGAATATAAAAACAATTAACCAAGTTTTTGTATGATGAAAACCATATCATTGGTTTTATTCATAGAAGTTATGAGCAGAAAAAAACTGAAAAAAAATATGAACGAAAACAAACCAAGAAAAATATCTCATTTGCAGCTGTTTCCTAAATATGCAAAAAGAAAACTTTCTTTGCATCCTGAAAACTAAATCATTGGGTGTTTTTTAATTTTTATTAGAAGTTTAAGAAACGAAGAATGTGAGAACAATATCTGGCTTCCAGTTATCTTACTGCGCCCATAGTTTCGAAGCTATCTTAGGACTAAAACATATTGTAAAACCATCGTATGTTGTGACGTCACTACAGCACACACCATAGTGATGTCATACCTTAGGATGGTTTTACAATTGGGTAGCACTAAGTTCGCTATGAAAATGAGGGCCCTGAATGTTTGTTTTTTTTCATTTTGAAAACCAGATTCTCGGTTTTATTTGAATATTTAATGTTGGTGTTTCTGTGAGAAATGAAATGTGTGTCTTGTAAACTTACAATTTACCGTTTTGTGTCTTGTCTGGAATGAGCCGAACTGAACAATGTCATCACGTTTGACCTGATCAATGTCTAACCCATAACATTTTAAAAATAAATATTGTATAAAATATTATTATGTGCAAACAATTGTTTTTTTTTAGATGTTTTTACTAGCTGATTTGAAGGAAAATTACAACTAATTTGGGGACAAATCAAACGTATGTATGTATATACATGTAGTGCCAGGTTAATAGTTTTTT

Transcript

ctg1054-2.31-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF06583	Neogenin_C	Neogenin C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003961	Domain	Fibronectin type III	Interproscan
IPR010560	Domain	Neogenin, C-terminal	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44170	PROTEIN SIDEKICK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1054-2.31-1 global RNA-seq network