Gene detail

Detailed information of ctg1053-7.23-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1053-7.23-1	YEAST SPT2-RELATED	chr9	37135005	37156334	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1053-7.23-1

TTCATCTCGTAGTTAATCCATGTCACATCATGTATTCGAATGGTTTGTTCTACATTTCGCACGATAGTGTTTACTAAGCATTTAATTCTCATCCAAGATGGACTACGCAGATTTAATGTCTATTTTAGACACTGCGAAACAGAAAACTGATGATGGTGCACAGAAAAACAAAGGTAAAACAAACGGAGAAAGGAGTATTAGTGTAGGTGCTGTACGGAAGACTAATGATAAGAAAAAGGCAGTAATAGTAGAGTCAATGACTCACACTTTCAAACCTGCTCGTGGAGCTAAAGTCGGGCAGAATGACAAATGGGCGGAATTCGAGGAGAAGATGAAGCAGCAGAAGAGAGATGCAATGAGAAAGAAAGCAGAAGAAATTAAAAGGAGATTAGAGGAAGAAGAACATAAAGAGAAGGAAGAGAAAGAAAGACTGAAGCAAGAGAGAAGGGAAGAAATGATCAGAGAGAAGAGGAAAGTCTGGGAGGAACAGTTTGGCAAGAAGTCTCAGGATAGCAAGAAGACTGCACAAGACAAAACAACAAAACATGGAAAACTTTCTTCTTCTGCTACCGACAGGAAAAGAACACACAGTATCAGCGACAATGAAGCAGATGAAGATGTTGTATCTGTCAAGCCCAAACCGAACCTGGAAAAACCGAAGAAGCCCAAGATTAAGAAATTTAATCGTCCAATGCCGCCACCTGTAAATTTTGCAGACATTTTAAAAATGGCAGAGCAGAAGCAACACGAAACTGTGGATGTTCTTAAAAAACCAATTCAGAAAAAAAAGAAACCCGAACAACGGCCGATGTCTCAGTTTGAGAAGGACAGGTTGGAAAGGATAAATAGCAAAGAATACAAGGATTGGGTTAAGCATGGCATAGGCAAACCGCCGTCTGCGGTAAAGCATCGGTCATCAGACGAGGACAGTTCAGATGACGATAGGAAGGTGGCAAAGAAAAATAGTGCTTCACTTTCTGCATCCAGTTCCAGACCGTCTATTAATTCTGTTAGAGACCGTTCACCTGCCATTTCGAAACCAGAACACAAATTGGGAATTCCTAAAAAGGAACACTCTTCGATGATTTCTCAGAAAAGGCCCATACCAGGACACGAAAAGACAAGTCTGTGTAAACAATCAGAGAAAACGAGTCACAGTTCTGACAGACATAAGGGTGGGTTTACGGTTCCGAAAATATCTGATTCTAGTGGTCAGAAAAAAGTGTCACATTCTTCATCATCAAACCAAGTGAGCAAATCATCTTCTAATTCCGACAGTGTCTCAAAGAAAGTAGCATCTCATTCAAAGGAAAATAACTTATCTGTGGGTAATTCGGCAAGACAGAGCACACATTCTAAGCATTCTTCATCTGATGGTTATTCCAATGTAAGTAAAAAACCTAAAATTTCATCCTCTTCGGATTCAAAGGTAGCAAGACCTTCTGGTCCTTCAAAATTGGGTGATGGTTCAGTACATAAGTCATCTTCAGATGGAAGGTCATCTGATGTTAAAAAGATTTCTAAATCTTCAGGATTACATAACAAGTCATCAGATGCCAGAGTTCCTTCAACAAAACATTCATCCAGTTCCATCTATGCCGGATCTTCTGAACATCGTAAGCCTGAAGTTACGGTGTCTTCGGTCCATGGACAGTCTGGGTCTCATAAAAAATCGTCTTCAGATCATTTATCCAATAGTGCAAAAGCCAGTTCAAGTCATAACAACAAGTCCTTGTCTTCAAATCATGGAAAGTCTGTGCCTTCAAATCATAGCTCTTCTGCATCTAGTCATGTAAAATCCTCTTCAGGCCATAGTCATTCTTCTGTTAATTCGGTAAAATCATCTTCAGATCATAAACACTCTGGTACTAATCATGTAACATTCACTTCAAAACATGGACAATCTGCTAGTAATCATGCAAAAATCTCATCAAGCCATAGCCAGTCTTCGTCTAGCAGTGCAAAACCATCTGGCCATCCTAAAATGCAAAGCCAGAAATCCTTCAATACCAAACATGAAGTGTCTTCGGATAAGAAATCATCATCAAAGTCATTTTTAAATGCAGTACATAAATATTCTGAAAACAAGATGGCAACGAAGTCCTTTTCAGGATCTAATCAGCACAAAGTATCCAGTAGCAGAGTAGTGGAAAATAATCATGGCAAACCAGTCGTTAAAACTGCTGAAAGAAATCACAAACAAGCTGATGTTGGTAAACTGGCTCCGAGGGACAAACATTCACAAAGCAGCCATAATGTAAGAATGAGCGAGAAGGAAGTTAATAGGTTAAAGGGCAAAGGTCAAGAATTCAAAAACCGTGAAACCAATAATAAGGTACACAGGGACAAAGGTAATGTGCATGATTCCAAGCATAAGAGTTTGTCGTCTGGTGACAGGAGAGATGTGGAGAGGTCAAATGGCAAAGGTGACCCCAGTGATAGAAACAACTATGATTCAGTGCATGAGAAGGTGTTGATTTGTGGACCTTCGTCACCGGAGGAAGAGAAGCCGAAGAAAGCTGCAGCACCTCCGGCTAGTAACCCGTGGGATAGAATATATGGAGAGATCAAGAAGAAAACTCCCAAACCAGTGTCGAGGAAGAGGCAGATTATAGATTCTGAAAGTGAGGACGAGGACATGGCTGGCTTCATCGATGACGATGATGACGACATTGAAGACCCGTCGGACCTCGATTACTCTAAATACATCAAACAGATATTTGGATATGACAGGAACAGGTACCGTGACGATGATGGTGATGTGGACAACATGGAGAGCAGCTACGCATCGCTGATGAAAGAGGAAGCCAGAAGTGCTAAAATTGGTCTGTTGGAGGATTTAGAAGACATGAAGAGGGAGGAAGAAGAGTTCAAACAGAAGATGATGAAGAAGAAAATAAGAAGAATTTGAGATTAGCACAACCTTGTTTTAAGGAGCATAGTCATAGTTGCATATTTTGGTTTGACCACCAGATATACTGAAACCCATTGGGAATGCAGCAACCAATTGATTGCTATTGCATGTGCGATGTTGCTATATAAAACACCCTATAACTCTTAACCCTTGCATACAGTTTTTGGATTATATATTGTCTACCAGAATACACCCAGTTATACAAAATAGGTTAAATATATGTACTTTAAAAAGATTATGATATCCATTTCAAAAATACCATTCTGACTAATGTGTTTTTAATGGAATTCAGTATATATAATTCAGTTAAATTTCTGTGTTCAAATGTAAAGAATTTTAAGCACATAAAAGAGTTACAATCATTAATAGAACAAAATTACTGATTGAGAAACCTTACAATGTACATGTTGTATATCTCCTGGGTTTACAAGGCCACACCACTCTTGTACATAAAGTCATTATACTCTATGCTGGAATTTTGGGTAAACGGTAACAGGTTTCTTAATAATTTTCTTAATTATTGTTCCAGGTTATCTTGGCAGTAAAACATCAGTTAGAACTTTGAGTACATAGGCATAGGATTACAGCATTTGGGGATTGGGAGGGGGGAGGGTGGGTGGGCAACTATATATATATATATATATATATATATGTATATCAATTTAATTTTTAAATGGGGGAAGCATTATTTTCAGAATTCGGGGGAAGGAGGATGTGCCCCTCCCAACTTCTGATGCCCATGAAGTACTTTCATTGCCACATTTTGTCTTGTTTTATTGAAATGAAAAGACTAAGGGAGCTTTCAGAATTATTAATGATTGTAAACTACCACTTAGGGTAAACACAAGAGTAAATAGTTGAGATAGTTTTGGGCTGTAAAGTTGAGTCTCTTCTCCCAAAGACGACCGAACATTTATTCAGTACTACAGTCAGACACGGTTTCAGCTTAAACATCGCTTTTCAATTATATGCTAGGCTCCAATTTAATGGAGGTAGGTAGAGAGCATCATCGATGACACTTTTGTGCCATCGGTAGAGCTCCTCAACAGTGGCGAAATGTATACACCTGGTGTACATTATCAGCCAATATTTAACATTTGCACATTTAAAAAAAAAAAAAAAAAAAAATGCCATAGGCAGGCTCATAATTGCTGTTGGTGGACTGTTTCACCCTTTGCAATTCTTTTAAAAATTGCCGTGGGAAACAAATTCTTAAGTTCAAGCCCTGATATGTGTGTGAATTGTGGTATTTCTGACACACATGACTTGTGAATAATTCAGATATGCATAACAATTAGTATTATGTCAACTCTTGACTATGCTTCTTAAAAACAACTTTTATTTTTTTTAACAAATATTTTATTTGGTAAAGACAATTTACTGCTTTTATGCCTTAGGGAAATGGGTGTTATCATTCTCAAGCAGTATCAGAAGCAGAATTCTGATGCTTATCAAGCATTTCGTTCACATAAAGATTGGTGGTATCTCTTCTTTTTTTTAAATGCAGTGACACATTCAGTTTTCGTGAAAAATTCCACCAATCTCTGGTTTAATTTTCTAAAAAATAATTTTTTTGCAAAGATAAATCTTAAGATCAAGATCAAGATCAAGAAAAAACTGAATCTGATTTATGTTTATGCTCTTAAATATAAACTAAAAAATAACTGGGATATTTCAAAATAATTTCTTCATACAACAGTAAAACTGCTGAACAGGACAGCAAACAGTGTGATGTACTGGACTGCTTGTGTTGATTTTTGCAGTATTCTGCTTCTGTTTACTCAGCTAAAAGTGTTTGTGTGTGTCTGTGTGTGTGGGTGTGTGTGTGTGAGAATAATATAAATTATAGCATTTTGTAGGTGTATAAATATGCTGGGGAGCTAGTCCTTTTCATGTGTAAAAGTGCTTTCAGTTATTTATGTTTATTTTATTTGGGAACAAAGATGTGATCTTGGATTATTACCTCGCATGACTAGTATATCAAATGCCATGTTATTTCCTGTTGCACGGTGTATATAAAAGACTCCTTGCTGCTAATACAAAAATATAACAGCTGATGATTAGCAAATCAATGTTCTCTAGTGGTGTTGTTTTATTTTGAATTACTTCCTTTAAAACTGCCCTAAACTGCTGATTCCAAGTTGTCTCTTTAATTGTTGGATGCGTGTACATATCACGTGTGTTGAAAAGGTCATAGACTAACAAAACTGGAATTTATTTGGGTTTAGCCATGATTTTATTGGTTTACTTAAATATTGATTGATATTTGGTAGTACCTACGCTTTTGGCAGACTGTTTAATGTGGAAACGTCTGCAAGATATTTTACAGGGAACGTCTTCTTCAGACGGACAAAAGTCATGGTATCTACTGCCCTGATTATACGAGTAGCTGGTGTGGTGGAAACAGGTTTCCTCTCTTTCTTGACCAAGTGTCAAAATGACCTTATTTTGGAAGCCAAATAGCCATAGTTTAAAATGTGCTGAGGTGTCATTAAATATTACTTTCCTTTCCTCTAGAAGGAGTATTATTTTTATGTCTCAACCTCTGAATAATTCATTTGTTATATATTATGTTTGTACCATCTGTATGTCCATCTTTACATATGTGTGAAAAGATTGATTGCATTTCAAGTTGTTTCTAGTTGTTGTCAAAGATGAATAATGCTTCTATTGTGGACAGGGATTTCAGTGTATTCTGTTCTGAAGTTGTCTATACAAGGAAATAATAAATTATTGATGGATGAAAAGAAGAGATCTGCTATAAATAAGATGTGAATGTTACTGATGAGTTGCATAAATTACTAGCTTGTTCTGTCTTTCATCAACTATTCAGAAATAAATACAAACAGTTGTCCAAATTAATTTCTATGAAATTTATGTTTGTTTTATTTTATTATCTTTACCATAATTATTACACCAGCTGGATTATATGATAATATGCCGGTACATGTACATAATGTTGATTTGTTAAAGGCATATTGTCACAGACAACTGACCTATTTAATGGTCTAACAAAGTATCACCTGAACAAATATAATTTGATTTGTCCCTAAATGTACTTTATTC

Transcript

ctg1053-7.23-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08243	SPT2	SPT2 chromatin protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013256	Family	Chromatin SPT2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22691	YEAST SPT2-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0006334	Biological Process	nucleosome assembly	Interproscan
GO:0006360	Biological Process	transcription by RNA polymerase I	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1053-7.23-1 global RNA-seq network