Gene detail

Detailed information of ctg1040-1.3-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1040-1.3-1	CENTROMERE PROTEIN H	chr2	32237146	32251551	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1040-1.3-1

AAAGCGGGAACAACTAATGCTGAACTGTTGGATGACTGAAGATTAAACAGATTCTATGATCATTTTCATACCCACAAATATACATATACATATGTATTTAGCTGGTTGAGTCAGCATGTCAACGATCCAGCCATCTGAATCCAACAATCTAAACTCTCACCTCTCTGAACATGCTGAGGTAGATGAGAACATTTCAGATGCCTCTTCTGATGTGCCTTCAGTTGTCACGGTGACCGATCTTCTCAAAGTCCATTCGTGGTTGGACAGACAGCTCTACGACTACAACAGTCAGATAGTGGCAGCGGAAATAGATTCTGAAGAGACTGATGACTTGGAGAAACTCCAAGAAAACCTGTCAGTACTACAGAATGATTTGGTGACAGAAGCTTCCAGAGCATCATTAAGAGATCTGACGATAAAAAGATTACAGCTTGGCCAGACTTTAAACCAGATTTTAACAAGTTCCCCTGATAGTGGTGAAGAACCGGTCTATCAGACAGACCCAGTGAAGAAAGAAGTTTTGGAGGAACTTCTGATCAAACAACGAGATCTTGTGTCTCAAACCGTTAAGAAAAGCGAGGTTGTGCAGGAGTTGAAAGACTCGTTAGCTAATATTAAAAAAGCTAATTTTGAACTGAAAGTTAACAATCGGAAGCTGATGGCCATAATCAAAGAGAGGCATTCATCACTGCAGGAGCAAGCCAAGTCATTCAGTAAGAATGAGAAGGGACAAAACATGAAGACTCATCTGCAGAAGCTCGTGGACAAGATAGTCATTCAGCGACAGGTTCTGAAGGGTGTCATTCTCGGGAGTGGGGTCAACTGGCAGCAGGATCCCACGATGAGAGAGCGAGTCATCAGACTTGGCGAGCCCTTAGACATCTAGGACAAGAACGGTGGTCGTTGGACTTGGCAAGCCTTTATACATAGGACAAGAAATACAGTTATCGGACTTAGCGAGCCCTTAGACATACATGACATACTTGCCAAGCTTGTAGACATATAGGACCAGACCAGACTGTCATCTGATTTGGCAAGCCCTTAGATATATAGGACAAGAAAGACTCATCAGACTCAGTGGGCCATTACAGATATAAGACAAGAAAGACTGTCATCAGCCTTGGCGAGCCCTTAGACATAGGACAAGAAAGACTCATTGGACTTGGCAAACCCTTAGACATGTGGGACAAGAAAGACTGTCATCGGGTTTGGCGAGACCTCAGACATATGGGACAAGAAAGTCAGTTATTTTTATAACTTGGTTTGTGAGAGTTGTTGAACATATAGGACAAGACCAAGAATAAATACAGCTTATTTAATGTTGGATAGTAATACTTATGACTTGGTCTGAATGAGCCGGCAGACACAGGACAGGAGCAGGACTAGTTTGCTTCCTGTCAGACCAACAGTAGAGCTTCGGCTTGATCAGAGCATGACTCCAGACAACACGTTTAATTGATGTTGGTCAATATACTTGTATATCTGTCTTGTCATGCCTTCATTGGACATACAGAACAAGAGTAGGGCTGAAAACAATGTTGGACAGTGTTAAATCAAACTTTGGTCTTGATGAGCCATTGTACAGACAGGGCAAGATCAGGGATAGATGCAACTAGTTAGTGAGTTTTGGTTCAAACAGGACAAGATCAGGGATAGACACAACTAGTTAGTGAGTCATTGTATAGACAGGACAAGACCATGGATAGACACAACTAGTTAGTGAGTCATTGTATAGACAGGACAAGACCATGGATAGACACAACTAGTTAGTGAGCCATTGTACAGACAGGGCAACATCAGGGATAGACACAACTAGTTAGTGAGTCATTGTATAGACAGGACAAGACCATGGATAGACACAACTAGTTAGTGAGCCATTGTTCAGACAGGACAAGACCAGGGGATAGACACAACTAGCTTGTTTAACAATGAACAAGCATATATCGGTTTTGGTAAACCACACTGGATTTACAGAACAAGGGCAACAATGAAAACAACAAAGTTTATTTGATGTTGCAATTAGTAGGATCTGATCTTGGTGAATCATTGTACACAGAGAACGAAGGCAAGACTAAATAAAACAAGTGTATTTGCAATTGGACAGTCAAGAAAAAAAGCCATTGGACATGGGACAGAGATGAGGAAAAAAAGGCCCAGCTTGCAAGTCTCTACAGACTGAGTGAGCAGCCGTGTGTATGAGATGGACAGTTTATGTTTGCGGTCTTGTGGAGTTTGTTTTATCGTGCTTGGTTTAACATTTTTCTGCACTATGGGTCTTCTTGTGAGAGAGTACTTATAAAAAGACTCCATATTGCTATATGATGATAAAGAATAATCTATATAGTGACATCAAGTGTCTTCTGCCACTTTAGACCTGGGGCTCAATCCACTAAACTCTCACAGCTTGGCAATGCAGAAATATACTTGCAAGAATGCTAAGCAGCATTCTATTGACAAGGCAGTACACACCACTGCCTTTGACCGTGATGCACTAGTTATTGGGCACAAGTTGAAATGGGGAAACCCAAGTGTATGGTGATCAGTCCTTCACCCAAGTTGACCCAACTGCATTGTGGTAAATGCTTTAACCTTGAGCTACATCCCAACCCTCGGTAAATGAAAGTTACAGTTTGTTTTGTTTACCACCACCACTTGAGCACATCGATTTATTAATCATTGCCTATTGAATGTCGAACATTTGGTCATTCTGGCATATTTTCTTATAATGGACACCCGCTACATTTTACCAAATAACTTCCAGCTGGGTCAAAGTTCAAGGTGCACCCAACTTTTGATAGAGAAGTTAATGCCACAAGTCCTGTGATTGGTGATAAATGTGAGTGTG

Transcript

ctg1040-1.3-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05837	CENP-H	Centromere protein H (CENP-H)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008426	Domain	Centromere protein H, C-terminal	Interproscan
IPR040034	Family	Centromere protein H	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48122	CENTROMERE PROTEIN H	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000776	Cellular Component	kinetochore	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0007059	Biological Process	chromosome segregation	Interproscan
GO:0043515	Molecular Function	kinetochore binding	Interproscan
GO:0051382	Biological Process	kinetochore assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1040-1.3-1 global RNA-seq network