| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ctg104-10.0-1 | CARBON CATABOLITE REPRESSOR PROTEIN 4 | chr8 | 37229664 | 37259602 | + |
| CDS | |||||
| ctg104-10.0-1 | |||||
| Transcript |
| ctg104-10.0-1 |
| Protein |
| ctg104-10.0-1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03372 | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR050410 | Family | CCR4/nocturin mRNA turnover and transcription | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12121 | CARBON CATABOLITE REPRESSOR PROTEIN 4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000175 | Molecular Function | 3'-5'-RNA exonuclease activity | Interproscan |
| GO:0000289 | Biological Process | nuclear-transcribed mRNA poly(A) tail shortening | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0004535 | Molecular Function | poly(A)-specific ribonuclease activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0030014 | Cellular Component | CCR4-NOT complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for ctg104-10.0-1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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