Gene detail

Detailed information of ctg1015-1.10-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1015-1.10-1	GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE	chr10	6255720	6282343	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1015-1.10-1

AGCTGCTGACTACAGTGAGTGAAGATGGATGCTGACGAGTTCCGAAGACATGGTAGAGAAATGATTGACTATGTAGCCAACTACCTGGAGACAATCCGACTGAGGCGACCGTTCCCCGATGTAAAACCTGGATATCTTCGTGAACTGGTGCCAGATGAAGCACCGCAAGATCCCGAACAGTGGAAGGACATCTTTAAAGATATTGAAGGAATTATCATGCCTGGGGCCTCTAGTCCAGCGTGTACGGAACTTGAGGTTGTCATGATGGACTGGCTGGGGAAGATGTTGAAACTGCCCGATGAGTTTTTGTTCTGTTCAGGTGGAAATGGAGGTGGGGTCATTCAGGGTACGGCTAGTGAAGCTACACTGGTGGCGTTGTTGTCTGCCCGGACGACAGCGATGATAAAGATTAAGAAGGATTCTCCGGACATGGAAGATGGAATGATTATCTCGAAGCTTGTAGCTTACTGCTCCGATCAGTCTCACTCGTCCGTGGAGCGGGCTGCGCTGATCGGGGTCGTGAAGATGAACAAACTGGAGACAGACGAGGATGGAGTCTTACATGGAATGGCTCTACAGAACGCCATTGCTGCCGACAAGGAGAAGGGTCTCATACCATTCTTTTTCTGTGCAACTCTGGGAACTACAATATCCTGTGCATTTGACAAAATTACAGAACTGGGACCAGTTTGCACTAATGCAGGGATTTGGATGCACATTGATGCAGCGTATGCAGGGAGTGCATTTATTTGTCCACAGTTCCGACCATTGCTTGATGGAGTGGAACATGCTACATCATTCAACTTTAACCCTCACAAATGGCTGCAGGTCAACTTTGATTGCTCGGCTATGTGGGTTAAAGACAAGCGCTTGGTTAGTGAAGCATTTGAAGTTGATCCACTCTACCTAAAACACGAGAACCAGGGCAAGATGCCGGACTACAGACACTGGCACATTCCACTGGGTCGAAGATTCCGGTCTCTGAAACTGTGGTTTGTTCTACGGATGTATGGCCAGAAAGGTCTACAGCAGTGTATTATGAAAGATGTAAACCTGGCTAAAGACTTTGAGTCGTATGTGAAGGCAGACCAAAGGTTTGAGATTATCAACACCAGCATGGGCCTCGTCTGTTTCAGATTACAGGGAGATAACGACACTAATGAGCGATTGTTGAAAGCTATCAATGACGAAGGACGAATCCACCTTGTGCCCTCCAAGATGAAAGGAAAATATTTTCTCCGCTTCGCTGTGTGTGCGTCACGCACCAACTTGGGAGATGTGAAATTTGCCTGGCAGGTCATACAGGATGCAACAGAAAACCTGCTCAAGGAAACATAATGAATGTTCAGGATTAAGAAACATCAATATGCATATACTGAATAGAATTGTACAAGTTCTTTCAGTACAAAAAAACATCTGTATCCAGAAACTGAATAATATTTATGCTAAAGGTTTTTTTCAAGGAACTGTAATGAATATTCAGTATAAAAAACATCAATGTCTGTATACTGAATAGCATTCTAATTGTGTGTTAAGGAAATGTAATGAATATTCATTATAAAAAACATCGTATCAGATATAGACTAGATTTCTAATTGTGTCTTAAGTATGTTAACACGAACAGCATGTATTCATTGAAGGTTGACTGTCGCATGTTTACATGTTTAATTTAGGATGGAGTCATCTTTTGATTTTCTAGTCGGGAATTTTTCCAAAGCATTTCTTAAAAACTACTATTTTATTAGATGGTTTATCAGTAATAACAGTTTGTATTCTATAATGGAACCAGACAAAACTGAACCGTATAAGCTATATACCAGAGGAGTAGTGTTCTGTTACATATAATATTCATTTTAAAATCATTTGTACCGGTTCTCAGTTTTGAACTTTTCCCTGAGACTTTGCCATGTGTGCGAGTTTTCTAAGCTAGTCTTGTGAGTGGCAGTCCTCCTACAGGCGGTGCAAGAGGGATGAAACCACCTGTTACATATCTCCTAGGGGAGAGCACATGATGGTGGATCAAGAAAACAATCATGACTTTGCTGAATGTCCTTTCAACTCTGCCTTATGCAGAGATACTATTTTGATATCGGAACATACACACATTACAGTCGGATAAGGCTCTGGCAAAAACACAACTTGAGATGGAAATGCTGACATTTTGGAGGGAAAATAATTGAAAATAAGTTGTTTTAGTCTTAATAACGGTATGTGTGTATTCAACTTGAGTGTTAACACAAACCCATTCTATTAGCAGTTTGAATTTGAGGTAGGATCATTTAGACTGAGTTGCAGTGACAGAAAGCATCAATGTTCATGTTTTACCAGGTTCCACTTTGTTTATAAAAAGTAAAAAAAAGGAAACAGAAGAAATACTGGGGGTTTGGGGTATGTTTAACAAAAGACAACATCATGGTTGTGTGTTTTAATTTCATGACTATTTTTATATAACGTTTGCCCTGCGTAGTGTTGCAGTGTGAATAATTTATTTTGTTTATAGTAATTTATCTTGTTTATATATTTCAATTAGACAGAAGATAATTGGTTTTTATTTATCAAGCGCAGTCTTTCAACCAGGATTTACCTAGAGTGGTTGCCTTTTTTTGCTTTGAAAGCTGCAACCAAATTTATTTTTAAGATTTTAAAAGCAATTTTATAAGCATTTAAATACATGTACATTCATCTGGTCCAGGAACTGTTGAGGACAGGAATTCTAAGCGTTTCAATCATACAGTTTACTAGTAATACTATATATTTGTTTTATTCCATTGATTAACAACAACTGAAGGGATCCACACTTATTATTGTCTTCATTTAACATGCAGTCATTCCTAGATTATTCATAGTTATGTGTATAGATAAGATGGATGTGTAGAATGATCTGTTTTACTGCAGCATTTTGATGCCATCTAAAATATTTGTTTACCATATATTTGCCTAACATGTAAAACTCGATATACCAGGCCCATAGGAACGATATCTGGAGTGGGAAGGTCACAATCTATAGTGGAGGGGTCACAGTGTTTAGTGGGTGTACAAGTCATATGTTTATTTTTATCTACATAGAGTCAGACCCCCCCCCCCCCATTTTTTGTCCTCAAGTGAGGAGGGCATAACCCACCCCAAACACCCCATCCCCATCCCTGGTTCCTAGGGACTTGTATCCTACAGATTACATTTATTTTCTAAATTGTTTTTTATTATTATTACTTCCTGTGCAGTACCACAACGCATGTTGGCCAAAACATTGTTTTATCTATAGAGCTCTCCAGGGTGGATCCAGGATTTCATGAAATGGGAGCCACCAGTCCCATGTGGTTGACAGTGGCAGCATGCGAGGCACAGAGTCAGATTGTTAATTTGTTGATCCAAGAAGAAATAAATTTGTGTTTTCTTGTCTATGTGATGTTGTTTTTGAAGTATACCTTGTGTGGTGTAAAT

Transcript

ctg1015-1.10-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00282	Pyridoxal_deC	Pyridoxal-dependent decarboxylase conserved domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002129	Family	Pyridoxal phosphate-dependent decarboxylase	Interproscan
IPR010977	Family	Aromatic-L-amino-acid decarboxylase	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015422	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015424	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR021115	Binding_site	Pyridoxal-phosphate binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11999	GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006520	Biological Process	amino acid metabolic process	Interproscan
GO:0016830	Molecular Function	carbon-carbon lyase activity	Interproscan
GO:0016831	Molecular Function	carboxy-lyase activity	Interproscan
GO:0019752	Biological Process	carboxylic acid metabolic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1015-1.10-1 global RNA-seq network