Gene detail

Detailed information of ctg1-9.2-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1-9.2-1	CENTROMERE/KINETOCHORE PROTEIN ZW10	chr4	82988885	83002997	+

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1-9.2-1

AATTTTGATACATGCACGTTTGCCAATTTGGCGCAATGACTTCATTTGTGACTGAAATTTTGGTCACAGCAGGCCAAATGGAAAAAGAAGAAATCCGTAGTCAGCTTGAAGCTCTTGCTAAAAGAATTGACCAGACAAAGATGGACATCTATGAGTTGACTGCTAACAAATATGTAGATTTTTGCCCAACATACGATATGACCAGAGACCTTACCTTCAGATCAAAGACGGTTTCCAGTGAAATAGAGGCTGTTAAAGAGAGAATTGAAACTGAGATTCGTGGACAACTGAATGTGTCGACTGGAGAGTTTCAGTTTCTTAAACAAAGCCTTCAGGAACTCACCAGCGTGTTGGCAGTCCTGAAAGCTTTCGTCAAACTTCAAGACTGCTTTGACGAAGCCTCCTCGGCAATAGAGAATAAACAATATTCCAAGGCTGCTGCAGCTCTGCTTTCCATGAAGGATCTGCTGTCACAACCCTTGCATGCGAAAGAGCATGAAATAAAAATCATCTCAGCCCTGCGTACAGAGTGCATGGTTCAGCAACAGAGTCTGATAGCTCTGTTGTCCGATCTGTGGAAAGAGGACATCGTCTGGGCTGTGTCTGATGTTTCTCCGGCAGATCTCAAGTGGTCCGAGTTGAAACTGTTGACTTGTGGGGATAATGCAACCATACTGCAAGAAGCTGTTGCTGCCATGAACATCTTGGGTGTACTGGATCCTAAGATCAAGGCATTCAGTGAAAAGGTCTTGAAGTATCTGATAACACCGGCACTTCAGAAAGATTGTGAGCTGAAAGTGAAGTCTTCCAAGCAAGCCAGTACTCTGCACGTTGCTCTCAAAGGCAGTGAGCACCATTCAGCTGATCACGAAACAGCATTTAAAAACATAAACAGTGTCCTGGAGTTCCTGTCATCCAGTTTCATGTATATGTCAACAGATAATGACAAGAAATCGTCAGTCACCCTTTTTGAGATGCTGGGTAGGGAGATATCAGCTACAGTTGTTGATATGGTCGTAAAGAATTGTCTTTCCATGGCTATACCAAGCAACAGCAAAGATCTTGACCAGTTTGATAGTGTGGTTTGTAAAACCGAAGGATTCCAGAAGCTTTTGCTTGATTGCAATTTTCTTCAGAAGGATAACACAGCGTTAATTAGCTACGTACAGAATGTTAATGTCCTTTTTGCCAACAAAAAATGTCAGGATATAATAGAGCAGGCACGGGCATTGATGACGTCAGAAATTCATGATACTATAGCACTTGGAGAGGGAAAACAACATGGTGAATTGCCGCAGTTAGACTCTGGTCCAAAAAGTAAGAAAACTGCTTTAGAGATGTGCTGTGAAATGGAACTGAGTGAGGAAACATTCAAGTTACCTAGATGCCGAATAAGTTTGACCATTAATAAAGTGATGGAACTGGCATACGAAACACTGCATGAGGCTACTGGCAGTTCAGTACAATGTGCTATACAGTTGTTCTATGCTGTGCGAAACATGTTTGAGATTTTCTGCAGTGTATTTCCAATCTACCACAAACATAATTTGGAGACCCTTCCACAGCTTGCAGCACTCCATCACAACAACTGCATGTTCATAGCCCACCACTTGATGACACTGGGGCATCAGTTCAAGAGTAAGCTGCCTCCAGCGCTTAACACAACCTTTCTTGACATGGTTCCGAAAATACGAAGAATAGGCACAGAGAGTTTCATTCACCAGATGAACCTTCAGAAGGAACAGCTCTTAGAATATCTTCATGGTGCTGATGGTTTCGCAAATGTTGCTGACAATGAACGTCTGTTTGCGGTGGAGAGGGCCATCAAGCAGGTTTTACATCTGCTGAATCACCTGCAGAACGTGTGGCAAGATGTGCTACCCATCAGTGTCTACAGAAAGGCCATTGGTATGCTGGTGAATGTTTTTGTTGAAGAAATCACAGAAAGCATCATAGCCCTGGAAGACATTTCATCTGATGATGCCAGACAGCTCTCACTTATTCTCTCTGGTGTGGTAGGAAAAGTCGGACCGATGTTTGATACCACTGACGAAAAAGCCAGCAATGCTGATGTTGAACTCCAAAGGAATGTACCAAACTGGAGAAAGTTTAAGGAACTGCAATTGGTTATAAATGGCAGTTTGCATGAAATTGTTGATAGATGGGCTGAGAAGAAGGGTCCACTAGCAGATGTGTTTTCTGCCAATGAACTGAAACAACTGATCAGGGCTCTGTTCCAAAACACTGACAGAAGAGCAGCAGTACTTGCCAAGATCCGATAAGTTAATGTCTAATGACACTGAATGTATAAAATAACTATGCATATTATCACAGATTAAACTCATTTGTTACAAGAAAAACATCTGAAATAAATATATTATTACGTTTATCAGTGTTTGATATTTACTTTTAATCTCATGTGCACATTTTCTGACTTGCAAAGACCTTTTGGTATAGTTTTTCAATAACCCCAGATGACATATATATTAAAGGGACAATCCTGAGTTTGTTGCATTGTAAGATGTTTCTGGCTCATAAAATATTTCTGCGATTAAACTTACATATTAAATATCTTTTCTTGTTTAGAATATTAGTGTCTGTATATTCAATGTGTTTCTGGTAGTCTTAATATTTGTAAGAAGACCAAACTGAATTCGGTCTTCAAATAATTTCGTACATACGAAAAAGTTATATTTTAGGAAATAAAATGAAATTTAACAGTAAAAATATTAGAACAATCACAAACATGTTTAATGTACAGCCACTAATGTTTTATGCAGAAAACTATATTTGATATGTAATTACAATCATTAAAAAGGCTCTGTTAGTCGACAACATATTAATAGTCATTGGAAGCATTCCCCTCTTCTCACTGAGGTGATTAGAATGCATGTATGCATTGCCCCACCTTAACTGAAATTAGAATTAATAACTGCCACCTCCTCTGATATTGAAATGTATTTTGCTTGTGACTAAGGTTGTCATGGAACGATAATTATTATACTCGGATACTATCCTAGTTGCATCTTTTATTTTTATTATAGTACAATTTTTTGTCAACTTCTTAATTTAAGCCCTGGGCCTAATTACAGATAAAATGTTATCTTTAAGGTGATATCTTCTGTATTTAAACCCAGGGCTTAAATACGAGAAATCCTGGTACGTTATTTAGAATTGCTTGGTTGTTTTCAAAGATTGTAATAGGTAGTAATCACATTTGCTTCATGTGGTGTATGAACCCTGTATTGCATACCAACTTCATCCAGTGTTTCCCAGTATACTAAAGTATTTAAACAATGTTAAATTTGAGATTGTATCAAAATGTGTTTTCAGTCGTACACTGTACCATCCAACAGCTAATAAATTATGTTTTAAAATAGTTGAACCTAGGAGATATTTTCTGGACTTTTTTCTTCAATGCCTCAAGATATTGAGCTGAAATTTTGTTGATAGCTTTATTAAGTTCCGACACTGTTACAGATTAAGTTTGACTTTAATGGTGATTTACCCAATTTTCATGTATTGCTTTAGCAGTACTCTCCGAATACTTGTTAAACCAGTGATTTCATGATATTATACCATACATTCGATCCAACCTACAACAAACTAATCTGATGCAGCTCATCCCTATTTCTTCTGGTTTTTTAATAATAAAAAATAAGCCTTTCAATAGATCTGTAGCATTTTTTACTGACCCCTTTCAAAATATAAAAAAATCAAAAGTTTTAAACACCTAATAGCTGTTGATTAAAACAAAATCAGTTCTTTGCCCAACCTGAATTCCAATCCATAATGCTGTCTACCAAAAGGAGTGTGTTGAGCAGTAAAGCAATCATAAGTGTAGAGGCAGGGGTGCGGGAGTGGGGAATGCCCCTCCC

Transcript

ctg1-9.2-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06248	Zw10_N	Centromere/kinetochore Zw10 N-terminal	Repeat	Interproscan
PF20665	Zw10_middle	Centromere/kinetochore protein zw10, middle domain	Repeat	Interproscan
PF20666	ZW10_C	Centromere/kinetochore protein zw10, C-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009361	Domain	Centromere/kinetochore protein zw10, N-terminal	Interproscan
IPR046362	Homologous_superfamily	Zw10/DSL1, C-terminal	Interproscan
IPR048343	Domain	Centromere/kinetochore protein zw10, C-terminal domain	Interproscan
IPR048344	Domain	Centromere/kinetochore protein zw10, middle domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12205	CENTROMERE/KINETOCHORE PROTEIN ZW10	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000278	Biological Process	mitotic cell cycle	Interproscan
GO:0000775	Cellular Component	chromosome, centromeric region	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006888	Biological Process	endoplasmic reticulum to Golgi vesicle-mediated transport	Interproscan
GO:0007094	Biological Process	mitotic spindle assembly checkpoint signaling	Interproscan
GO:1990423	Cellular Component	RZZ complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1-9.2-1 global RNA-seq network