Gene detail

Detailed information of ctg1-8.21-1 in Gigantopelta aegis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ctg1-8.21-1	AGAP002036-PA	chr4	83016528	83023544	-

Gene Structure

More details in Jbrowse Sequence

CDS

ctg1-8.21-1

CTGCAAGATTTGACGTGGAAGACGGTGTTTTTACTCGGTTTCGCCACGGCTGCCCGTGTCTCAGAACTCCATGCTCTTGATGTAGACTTGGTACATTTTCACCGAGATCGGCGTGCAGTCAACTTGGGGTTACTCATGAACTTTGTTGCAAAGAATCAGTTACCAGACCAAGCGCCTCGCTCGTATGTTGTGCAGGCCCTCTCCTCTATCGTTGGTCCGGCGGACGTTGAGGACTTGGTGTTGTGCCCTGTTAGAGCCCTGCACCAGTACATCGAGAGGACCAGATCTTTTCGACAACATCGCAAAAGACTTTTCCTCTCCTGTAACCAGAGTCAGTTGAGGGATATTACCAAGAACATGGTGGCCACCTGGATCCGGTCTTCTATCCTGACCGCCTATCAGAAGGAGGGTTTACCTGCTCCGTCTGCTTCCAATCCGCATGAACTCCGTGCCTTGGCTGCCACGATGTCCCTGCACTGCAACACATCCATTCAGCACATCATCACTGGCTGTTTCTGGGCTACGGACTCCATCTTCGCCAACTATTATCTGAGGGATGTTTCCACAGAAGACAGTCATCAAGTGCTTGATGGAACACACAATGCAGCTCGCAAATTTTTGGATGGACTTCACAGTGTCGCCAGTACAATTGGAACGGTCGGTGCCAAACCTACGAAGATGTTGGCAGAATGGACGGCTGATCAGATAGCTCCAGCATACTGGGTGCCAAACTCTCAAATTCTGGAATGCCATGACTGCAAGGTGGATTTTACTCATAACGACCAAAAACATCACTGTCGAGCGTGTGGACAAGGTTTCTGTGACGAATGCTCTTTGAAAAGCCGAGCTGTGCCAGAACGAGGCTGGGGCTTGTCTCCAGTTAGAGTGTGCAAGAAATGTTACGAAGGACAAGGTGAAGGTGGGGATATGCCCATCACAGCTCGTAAAGTTGGTGAAGTTGTTAGCTCAACCTTTGGTGCAGTTGCATCTGCCATTGATCTACCTTTTGGGATGCTAAAAGATTCTGCCCGACCAGCCTACTGGGTTCCTGATGACCAGATCACAGAGTGCAATATATGCAAGGTGAAGTTCTCCTACAAGATCCCCAAGCACCACTGTCGAGCCTGTGGACAGGGTGTGTGCGACGACTGCTCTCCAAATAAAATACCAGTACCCATGCGTGGCTGGGACTACCCTGTCCGAGTGTGCACCAAGTGCGAAAAAAGAAAAGATCATCTTTAGCAAACACAAATCATTCCACCGTATAAATAACATTTCCAGGTGGTTTGTTTGGCAGACTTTTGTTGATTTTGTCCCTCACAGTCAGAATTGCCCAAGGCAAGTATGTGTCGGTGATGAGATGTCAAAACAAATTTTTTGACCGAAGATTAATACCTTTTCAGTTAGGTTCAATTAAAAAAACGGCAGAACGTAACATAATATATAGAGCCGAATTTACGAAGCCCGTTTTTCTTAAACACAGATGTTTAAACAATGTAAATACATGTAGTATTCAGCCCATAATGTTCTAATTGAAAAGTATTAGGGGAAGATATGTAATGAACAGTGAAGAAAATGAGTCATTGGTAAAATTAAGATGTTTGATCTAAAATGCAACTGGAAGTATTTGAAGGATTCCCTTCAAGATTCAGACCAGTGTCAGACACTGTAATTACAAGTCATTGTTTTCAAGATGGATGGACCAAGCTGCTTCGTCATGTTGCCTTTGATTTTGTTTTTGTTGCCTTACATAAAGTGTATGACATGTTTAGTTAGAGCTAAGGGACTTCACAATTATCAACATTCTCACCTTACAAACCGAACACTAGGGCATAGGGTTAGTTAATGTCGGCATATGCTTTTAAAACAATATGTACAACACAATTAATTAATAATTTACTCCGTTAGTTAATATTGGTTCTTTGTCTTATTAAGTGTTATTTGAAAATCGCGAAAATGTTGATAATTGTCAAAGGCCATTAACTTAATTTTTATAATGTTTTTGTTGTCTTGTACCATGATATTATAGTTATTTAATCTTAACCTACAAATGAATTATATTATTTGATGATTATGCTTTGGTTTCACATTGATTAACATGTTTTGAGTTGATGTTAGGTTAGCATACTTAAGTTACATATTAAAAGCATGCTTTTTAAAAAAGTATGTATTTAAATAAATGTTATTGTAGCTATCTGTGAGTGCTTTTGGTTGATGAATCCATGTGAATGAATCTTTAGATAATCATTATGGTATTCAAGTTTATAATTTTGTGAGGTGGGAGTAGAGCTTAGCCTTGCTTTTAAATCTACTGAATCAGAGTGTCCTATTTATTTGGATTTTAATATGAAAATTAACTTTAACTGTGATATATGTACATGTATTTTTATTTCTTATAACTGAAAACATATATGTGACACAGAAAAATTGCACAACGAAAGTTTAGCTAATGTTAAAAGAAATGGTATAACATTTATAAATTAACCTATTTCTATTAATTAGTATTCACATCTGAAATGTTTACCATTTACAAACAACATAAACTCATCAACTTTTGCCTTAACACAACAGGAGGATCTGGTTTTCTTTTAAGTTTATTCAACCATGGCATATTTAGACATCATAAAATATATTTGCTAAACTTTCGTTGTTGAGTATATTTCTAGAAGTTATTGCTAACACTGTAATAATGTTATAATACAGGATATTTAAATAGTAAAAGATTAGTTGACACATGCATACTAATATATTGAAATCCTGGGTCAATGCTGGCTAATTAACATGATTACCTTTCGTATTTGAAGTGCTAATGCATGTAGGAATATAATTAGTCGTTCAGTATACTAGCTGTGAAAACAAAATGCAAATACAATCAGTCAGGTAGTATTGTTATTTGTCTGTCTGTGAGTTTTGCTTGTTCTTCATTGCCTCCCAAAGATCCAGAATTGTACAAGATAATTATGTTAGGTGGTGGGCACTGAATAAATTAATCTTGAAAGAAGAGATCATCTTTGTGGCCCAGTTTTGTTGCATGTTCAAAATGAAAATGGTTACATTTTAACAGAATGGAGTTTTACTGGTTGTCTGTTCAATGTTGTTGTTATTAGTTTGTGATACAATATTTTGTATGGGGTTTCTTTCTTTTTTTCTCTTTTTTTCAATATTGCAGTGTTTAAACTGGTGTCCAAAAGATGGTTGTTTTTTCAGATACTAGGAATTAAGAGAATGCCATCGTGTTTGAAATTGAATAGAGAAAGAGAAATGTTATCTGGTTTGTCCACGATTTAACAAATTAACAGAAGACCTGTTAATGAAAAGTAAATGGATCTTATCTGATACTTGAAAGTGGAAGGAACGGTGTCTGGTATATTTGACAGTGGAAGAAATGGTGTCTGGTATATTTGAGAGTGGAA

Transcript

ctg1-8.21-1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01363	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000306	Domain	FYVE zinc finger	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR017455	Domain	Zinc finger, FYVE-related	Interproscan
IPR042427	Family	Zinc finger FYVE domain-containing protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46624	AGAP002036-PA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005545	Molecular Function	1-phosphatidylinositol binding	Interproscan
GO:0005547	Molecular Function	phosphatidylinositol-3,4,5-trisphosphate binding	Interproscan
GO:0005811	Cellular Component	lipid droplet	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0032266	Molecular Function	phosphatidylinositol-3-phosphate binding	Interproscan
GO:0043325	Molecular Function	phosphatidylinositol-3,4-bisphosphate binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0140042	Biological Process	lipid droplet formation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for ctg1-8.21-1 global RNA-seq network