Gene detail

Detailed information of alvinactis_v1_g998 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g998	NONRIBOSOMAL PEPTIDE SYNTHETASE	chr_1	17105581	17115361	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g998

ATGTCCGATTCTAATTTACACCGTCTTTTTTCACGACAAGCAAAATCTTTTTGTGGCAACATCGCCATTGAATCTGAAAGTATCAAGTTGACGTACGAAACTGTCGACCGCAAAAGTAACCGTTTTGCAAAGTTTCTGATAGAAAAATTTGCTCTCCAAAATGAAGACGTCGTTGCCATCTTATTGCCCCGTTCACCAGAGTTATACATCACGATGCTTGCAGTTCTAAAAGCAGGAGGCGTGTATGTCTGTATCGACCCACAACACCAACGAAGCAGACTGGAATTCATCCTCAAGGACACCAAGGCTATTGCACTCATCACTACTCGGTGTATCCAACATGATCTCCACGTTGTACCTGAAGATACTCCTATATTGGATATAAAGTGCGCAACTGTTCAACAGGAGCTTAAGTCTTACAGTACTGCCCCCTTACTGAATCGCCACGTCCCGTCGTCTAACTTGTGCTACATTATCTACACATCGGGATCGACTGGCAATCCCAAAGGAGTGGAAATCGAGCACAGAACTGTCCTGAACTTCATTGAAGGAGAATTAGAGATCTATCCCGTCACTTCTCAAGACAGAGTTCTGCAGGGATTTTCGCCCAGCTTTGATGCTTCAGTGGAAGAGATATGGCTTGCTTTCAGTACAGGTGCTACGTTAGTAGTTGCGTCTCCAGAAGTGATGCAGTCAGGACCAGATCTCCCCTATCACCTGCAGAGACTAAGAATCACTGTATTTTCCACTGTGCCCGCCCTACTAAGAACCGTGGATGCTTCAAACACCAACCTTCCTCTTCTAAAGCTTTTGATTTTAGGAGGGGAGGCCTGCGGAGAAGATTTGTCTGTCTGGGCAGAAGGGAGAATGTTGGTCAACTCGTATGGTCCGACGGAGACAACTGTTGTAGCTACTGCTTCAATCGTTAAACCAAACCAGAAAATTACCATCGGCAAACCACTGAAGAATTATAAAGTCTGTGTGCTTGATAACAATTTCAACGAGGTACCACATGGCCAGCAAGGAGAGTTGTGCATTAGTGGACAGTGCCTGGCACGGGGGTACAGGAACCTAAAGGAGAAAACCACTCAACAGTTCATTACACATGGTACCCATGGGAAGATCTACCGCACAGGGGATTTGGCGCGCTTTACAGATAGCGGTGATTTGGAGTATCTTGGAAGAATTGATGACCAAGTCAAAATACGTGGATTCCGAGTCGAAGTCGGCAGTATCGAGACACACCTTCATGATCAGGGGAACGTTGGAATCGTGTCGGTCGTTGTCCTTGCTAACCCAAAGGGTCAACAGTTTATGATAGCGCATATTAAGCTTGAAAACAAAGACGAGGGATTTGATTCCTTTACTGTTGTGAAAAACTTGAAGAAGTCTCTTCCAGAATATATGATACCAAACGGCTATGTCCTGCACGATGATTTACCCAAACTGGCAAGTGGGAAGATAGACAAAAAGAAACTGAAATCCTCAACGTTGGAGATGCAGCCGTTTAAAAGCAGCCAACAGAGCTACATCGCTCCTCGCAACGACATTGAAAAGATGATCTGTGAAGTATGGGAGGAGAAGCTTGGCAACCAGAAGGTCTCAATCGAGGACAACTTCTTTGATCTGGGTGGGCAGTCTGTAGTTGGAGCATTGGTCGTCAGTCAGCTTAGAAAGGAAGGTATTAATGTGTCGGTAAGAGACTTGTACCTCAATCCAACCGTAGCTGGATTATCTGAAGTAGTACAGACGTCGAGAAACTCTCGTTCAAATCAGGTGACGATCCATATCCCCACAACGCCTTTGTCTGGTAAGCCCAGGTACTACTTGTGTGCACTACTACAAGCCTTGTGGCTACTCCTGACGACAGCGTCTATCGCTGTTTTTGGTCTATACTTGGTGATATTGTCCTACGAGCTTTTGGAGTATGTCTATGGTATCGGAGGAGTCCAGGCTGTCACGTGGGTAGTGCTGGGTTTCCTTGTGGTTTCTCTCCCGTTGTATGTTTGTTATGCCATACTCCAGGCTTACATTGTTAAAATGATATTTCTTTGGCGTGTAAAGCCTGGTGCATACGCGTTATGGAGCACGTATTATCTGAGATGGTGGATTGTCAAAACTACAAAGTCTTGGATCCCAACCACTGCAATATCTGGTACACCTTTGATGAACATGTATGCGCGTATCATGGGAGCAACGATCGGAACTGGGGTCTACTACGGAACACCGTTATCATGTGACTTCGACTTGCTTGAAATCGGCTCCAGTGTTACAATCGAACAACAAGTAGCGTTCGAGACGCACCGTGTTGACAAAGGAGCCTTGATTCTTGGACGTGTCACCATCGCAGACCACTGTAGCATTGGAGCCAGAGCAACGATCGCTTTGAACAGCATCATCAAAGAGAACACGCATGTAGAACCGCTGACCTTAGTGACTGACGACAGTGTCATTGAAGAAAACTCCCATGTGTATGGTTCACCAGCCACCAAATTCACTGGGACGAGCCTGTGTGACTTTAAACCCAAAGCGTGGTCTTGGTCATGGTGGGTACCCTGTGTTCAAGTGGGATTTCTTTCAGTCTATACTGTTATCTTGGCGCTTCCTGTCGTGTGTGCAGCTGCCATCATATTGTCAGTGCCGTACCTTTTCAACGCATTCCTCGACTGGAATGTGGGTGTTATTGCCATGATGGTACCAGTAGCAACTGTACTGATACAAACATTATCTTACTTGCTGACTGCTCTGCTCAAGTGGGCTGTTGTTGGGAAAATGGAGGAAGGCATCTTTCCCATCAATTCTTGGAAGTTTATTGAGCTATGGATCATGGAGCGTCTAATTCTGTTCACACTGTCCATCTTCAAAGAGCTCTTTGCGACGCTCTACACCAATGTCTGGTTAAAGACACTGGGGATGGAAGAAGGATGTTTCGTGGCAGACCACGTGTGCTTGGGTGGCCCGGTATTTCGAGGGGACGTGTTCTCGCTCACCAAGACGACAACTGGCTGTCGCACATTTCTTGGCAACAACAGTGTCGTGAAACAACATTCCTTCGTCGGCGACGAAGCTTTGCTTGGTGTACTAAGCACAACTCCTGATTTTGCAGAGAACAAAAGTTCTTGGCTTGGGTCACCTTCTTTTCTTCTCCCTTCAAGAAAAGAGAGCGACAAAGTCCATCCCTCCACGCGTACATTCAACCCACCTTGGTATTTGTATGTTAGTCGACTGACTTGGGAGTTTTTCAAGCTCTTCACTCCTTTGATGATTAAGCTTTACGCCGTGTATGGATTTTCCACGCTGTTGCTTAAAGTGTCATACCCATTCTTCGAAGGATGGTCCGTGCTGTTCTGGCTTTCCGCTGTATTGTGGGAATGGGGAATCTTTGCTTGTATTATTCTTCTCGTCATTTTGTCCAAGTGGATCCTCATTGGTCGCTTCCGTCCTTGTGAAAGACCTTTGTGGAGTAGCTTTGTTTGGCGATCCGAGCTTGTAGCGTCCCTAGAAGAAAACGTGGCATTCCCGTTTGGAGTGTCATCTCTACTTGGTACTCCGTTTATGAGTTGGTGGTACCGTGCCCTGGGAGCGAAGATAGGTTCACGGGTATACCTAGCAACCATTTACCTGACAGAAGCTGATCTCATCGAGATAGGAGATAAATCATGTATTGCTGAAGGCACTACTATCCAGTCTCATCTCTTTGAAGACCGTGTTATGAAGATGGACAAACTGGTTGTTGGTAAGGAATGCACCGTTTGTAGCAACTCCATTGTTCTCTATGGCGCTAAACTGGAAGACCGCTGTACCTTGATGCCGCTGTCACTTTGCATGAAATCGGAGACTCTTCAAGGCGATGCAGTGTATTGTGGGATACCTTCGCAGAATGTTTATACCGACTCCTGTGAAGGCCTGTTTACAGAACGTCCCAACTCCAAAGAAACGGCCTCTCTCCTTGAAGATGCCTATTATAACCCTCAACTGGATTTCCCTTGA

Transcript

alvinactis_v1_g998

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00501	AMP-binding	AMP-binding enzyme	Family	Interproscan
PF00550	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000873	Domain	AMP-dependent synthetase/ligase domain	Interproscan
IPR009081	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR010071	Domain	Amino acid adenylation domain	Interproscan
IPR011004	Homologous_superfamily	Trimeric LpxA-like superfamily	Interproscan
IPR020845	Conserved_site	AMP-binding, conserved site	Interproscan
IPR036736	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR045851	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45527	NONRIBOSOMAL PEPTIDE SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0031177	Molecular Function	phosphopantetheine binding	Interproscan
GO:0043041	Biological Process	amino acid activation for nonribosomal peptide biosynthetic process	Interproscan
GO:0044550	Biological Process	secondary metabolite biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-