| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g9956 | GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 | chr_5 | 585153 | 590097 | - |
| CDS | |||||
| alvinactis_v1_g9956 | |||||
| Transcript |
| alvinactis_v1_g9956 |
| Protein |
| alvinactis_v1_g9956 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02270 | TFIIF_beta | TFIIF, beta subunit HTH domain | Domain | Interproscan |
| PF17683 | TFIIF_beta_N | TFIIF, beta subunit N-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003196 | Family | Transcription initiation factor IIF, beta subunit | Interproscan |
| IPR011039 | Homologous_superfamily | Transcription Factor IIF, Rap30/Rap74, interaction | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR040450 | Domain | TFIIF beta subunit, HTH domain | Interproscan |
| IPR040504 | Domain | TFIIF, beta subunit, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10445 | GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005674 | Cellular Component | transcription factor TFIIF complex | Interproscan |
| GO:0006366 | Biological Process | transcription by RNA polymerase II | Interproscan |
| GO:0006367 | Biological Process | transcription initiation at RNA polymerase II promoter | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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