Gene detail

Detailed information of alvinactis_v1_g9493 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g9493	FATTY ACID SYNTHASE	chr_4	25534668	25538263	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g9493

ATGAATGTTTACAAAAACGGAAAACTTGGTAGCTACCGTCATTTGCCGATGGTCCATGGAGAATCCCAGAACGAGGAAACAGAGCATGCTTACGTCAATGTTCTAACTCGCGGTGACTTGTCTTCTCTTCGTTGGATTGCCTCACATTTGAAGTACGCACCAGGAAAAGAGGGCAACACCGAACTCTGCTCAGTCAATTATGCATCCTTGAACTTCCGTGACATTATGTTGGCAACAGGAAAGCTACCACCAGATGCACTACCTGGTGACCTCGCACAGCAAGACTGCATTCTTGGAATGGAATTCTCTGGAAGAAACCAGAGCGGAAAACGCATCATGGGCCTGCTTCCAGCGCAAGCGTTGGCGACCACCGTCTTGGCTGATCAGAGGTTCACATGGGAGGTTCCTGACAGTTGGAGCCTTTTGGAAGCAGCATCGGTCCCAGTGGTATACTCCACTGCCTACTACGCATTAATGGTCCGTGGAAATCTCCGACCAGGGCAGTCTGTACTTATTCATTCTGGTTCAGGAGGCGTTGGTCAAGCTGCCATCTCGATCTGCTTGACCATGGGCTGCGAAGTGTACACCACTGTGGGATCCAAGGAAAAGAGGAACTACCTTTTGGATAGGTTCCCAAAGCTCAAGAACGAGAATATTGGAAATTCCCGCGACGTTACCTTCGAACCCATGGTGATGCATGGCACTAGCGGTCGTGGCGTAGACCTTGTTCTCAACTCCCTTGCAGAGGAAAAGCTTCAAGCAAGCCTTCGTTGTCTGGCCAGACATGGTCGCTTCCTGGAGATTGGCAAGTACGACTTGTCCAACAACACACCCCTTGGTATGGCCCTTTTCCTGAGAAACGTTTCATTCCATGGAATACTCTTGGACGCCATTTTTGAGGAAGGTAATCCAGAATGGAAAGAGGTCTCGGATCTTGTTACTGCTGGCATTGCATCAGGTGCTGTTCGTACTCTCAAGACATCTCTCTTCGACCGCGATGAAATCGAGCCGGCGTTCCGTTTCATGGCGCAAGGAAAACACATCGGAAAAGTTGTAATTCAAGTGAGACCCGAGAAGGAGTCTAGTTCTGTCGTCAAGCTTGTTGCCCATGCACGAAGCATGTGTGACCCCAAAAAGAGTTACGTCATCACAGGTGGACTTGGAGGCTTTGGACTCGAGTTGGCACATTGGTTGGTGGAACGAGGGGCGAGAAACTTGGTCCTCACAAGCAGAAGAGGTATTCGCACTGGTTATCAGGCACGTAGGGTTCAGGTATGGCAAGATCAAGGAGTACAAGTCAAGATCTCTACTAGCGACGTTGGTACCGAAGAAGGTACTCAAGCTATCATCAAAGAAGCCCAAGCACTTGGAAAACTCGGTGGTGTATTCCACCTTGCAGTGGTCCTACGAGACGGTATGTTCGAGAACCAAACACCTACTGCATTCCAAGAAGTCTGCAAACCAAAATACCATGGTACCATCTATCTGGACAACCTCACGCGACAGGCAGCCATTACCAAAGACTTGCACTGGTTCGTGGTGTTTTCATCAGTGTCTAGTGGTCGTGGAAATGCTGGCCAATCCAACTACGGTTTTGCCAACTCTGGTATGGAGCGCATCTGTGAAAAGCGAGTGGAAGATGGTCTTCCTGGATTGGCCATTCAGTGGGGTGCTATTGGAGACGTAGGTTTGATTCAGGACACGATGGGAGGCTCAAATGATACCGTCATCGGTGGCACACTACCACAGCGCATGAGCAACTGTCTGTCTGTGCTGGACAGGTTTTTATCACAGACGCACCCAGTAATGTCAAGCTTCGTATTGGCTGCTAAGCACTCGTCAAAGGGTGACAAAGGCTCCGGCGGCGATCTCGTCGGTGCAGTAGCAAGGATCCTTGGAGTAAGCGATGTAGAAACGATTAATCCTGACACTACACTGGCTGACCTTGGTCTTGATTCTTTGATGGGCGTAGAAGTCCGACAGACCCTGGAGCGAGACTATGATATCCAGTTAGCAATGAAAGAAGTTCGATTGCTGACAATCAACTCCCTCCGTGACCTATCAAGTGGTGGAGCCTCAAAGACAGAAAACGAGCCAACAGAAGCAAAACAAGTCGACAAGGTCGAAGTGATCGGTAGTCAAGTTATCCCTCACTTCAGCGACAAGACTCTAATCAACCTGAACGACGTCAACAACGGCCAGAAACCTTTGTTCGTGTTGCACAACATCAACGGATCGGTAGAACCTCTCGAATCCTTGGCATCTGCCTTGAGCTGTCCAGTGATTGGTTTACAATACACGACAGATGCTCCAAGCGACTCGATCCAGTCCCTTGCAGCATTCTACATCAAACAGATCAGGGAGATGGTCCCACGTGGTCCTTACTACATATCAGGGTACTCGTTTGGCGCTTGCGTAGCTCTAGAGATGTCGATTCAGTTGGAGAAGACGAAGGAGGTCGAGAGTCTGGTCCTGATGGATGGCTCACAAGAGTACGTGGCCGCGCACACCATGTGGCATCGAAAACGACTGACGGTGGAGGAGGATTCTTGGAAACCCGAGGCTGTTGCTGAGGCGTTATGTATCTTGGCGAGCCACTATGCCAAAGTAGACAAGATAAAACTAATGGAGTCCATCCAGTCTTTATCGTCTATTGAAACCAACTAA

Transcript

alvinactis_v1_g9493

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00550	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan
PF00975	Thioesterase	Thioesterase domain	Domain	Interproscan
PF08659	KR	KR domain	Family	Interproscan
PF13602	ADH_zinc_N_2	Zinc-binding dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001031	Domain	Thioesterase	Interproscan
IPR006162	PTM	Phosphopantetheine attachment site	Interproscan
IPR009081	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR011032	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR013968	Domain	Polyketide synthase, ketoreductase domain	Interproscan
IPR020806	Domain	Polyketide synthase, phosphopantetheine-binding domain	Interproscan
IPR020843	Domain	Polyketide synthase, enoylreductase domain	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR036736	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR050091	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004312	Molecular Function	fatty acid synthase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0031177	Molecular Function	phosphopantetheine binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-