Detailed information of alvinactis_v1_g9453 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g9453HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66chr_42506060425114678+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08640U3_assoc_6U3 small nucleolar RNA-associated protein 6FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013949FamilyU3 small nucleolar RNA-associated protein 6Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR23271HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034388Cellular ComponentPwp2p-containing subcomplex of 90S preribosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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