Gene detail

Detailed information of alvinactis_v1_g9300 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g9300	SPHINGOSINE KINASE	chr_4	23002281	23019274	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g9300

ATGAACAACAAGATGGCCGAATCCGTTCTTCTTCAAAGCTGCTTTCAACTTTTACCGGGTAAAAGATTCTTCGAAGTTCGACTCACGCGGACTAAACTAGTCTATCAGCAGACGTCCATTGATTCTTGCTGCAATCAGTCGGCTTTATTTACTATCAACGTAGAAGACATATACAGCGCTAAAGTGTTTAGAAGTAGAATAGACGACGACGACAACGCCTATTTGCATGTTTTTACGTGTCCTATTAAAGGAAAAAGGAGAATTCGGCGAAGAATTCGGTTTAAAGTCAGTGGTTGGGAGAATGTTGAGGCCAATATTCGGGGAGCCGAACAATGGCTGAAGATGATTTTATGGCTTGTTCAAGATCCCGAGGTCGATACTACCACGCTTAAAGATAAGAATTTACCAGCATGTCGCAAGTTTCTTGTTCTTGTGAACCCTTCCAGTGGACCAGGGAAGAGTCTGAAGATCTTTCAGAATCATGTAGCACCAATGTTCAGAGAAGCATCTATAGATTATACCTTACTTGTAACAGAATATGCTGGACATGCAGAGAAGATTGCATTAGAACTAAATGTTGAAGACTGGGATGGCATTGTTATATGTTCTGGAGATGGATTAGTCTATGAGTTTGTTAATGGTCTAATGAATAGAGCTGATTGGAAGAACGCTATTTACATGCCTCTTGGTGTCATTCCTACTGGGTCTGGGAATGCTTTGTGTTTTTCAGCACTCTACGCATCAGGGGAACCGTTTGAAACAACAGCTGCCATTTATGCAGTGATTCGTGGCCAAACATTTGAACTGGACATATGCACCATTGAGACACCAAGTCAAAAACTCTATTCTTTCCTCTCGCTTACCTGGGGTATTATATCTGATGTTGATATAGAATCTGAAAAATACAGATACCTTGGCAATGCAAGGTTTACATTGGGTGCAGTTATAAGAATCTTAGGCCTACGTGTATATAGGGGCAGATTGTCATATTGCCCTGTTGATGATGATCTTCATGTTACAGCTAGTGTGGATGTACCAAAAGAGGGAAGGCCAGACCAGGAGAATGACCTTTCTAGTTTCCATTCCTTTCCAAACAGCCCAAGTGGGTCATTTTTTCAAAATAATATTGCCACTGAAGAGAAACTAGAAAGTCATGACAATGCTGGTATGGTTGACAGTGGACACCCATCAATCAATGATGTAGCAAATTCAGGAAGGCGCTGCCAAGGTCCTCCCACTTCACTACTGCCTCCACTCAAGAAACAAATACCTTCAAACTGGAGAACTGTTGAGGGGGAATTTATCATGGGGTGCTCTGTTCTGCTTACACATCTAGGACCAGATATTGTTGCTGCTCCACAAGCCAAGTTTGGTGACGGCATCTTACATATAGCTTATGTTAAATCTGGAATATCAAGACTAAGACTTTTGTCATTATTTGGCGAGATGGAGACTGGGGCTCATTTGGATTCTGATGAATGTGTGTATATAAAGGCACGTGCCTTTAGGCTTGAACCAGATCTCTCTCAACCAGGGACTATAGCAATTGATGGAGAAAACATCCCTTATTCTACTGTACAGGCAAACGCCACCTACGTTCGACGTGTTGTTGATATTCGTAAGACTCTGAAAATACTTGAGTTTCACTTTGCCGAACTGATATTATGTGCAGAAGAACCCGATTTACCGTCGGATAAGGATGAAAGCGATGCTTACATGATTGACCGAGATCCTCGCTACTTTGCTCCTGTTCTGAACTACCTACGACATGGAAAGCTCATTATAGACAGAGATCTTCACGATGAAGGAGTGCTTGAAGAAGCAGAATTTTATAGTATAGAGCCACTTGTCAAGATTATTAAAGAAAAAATACAAACTAGAGAAGACAGACAAAGATTGCCATTGTTAGCAAAGAAACATGTTTATCGAGTGTTGCAATGTCATGAAGATGAACTAACACAGATGGTATCAACAATgtcagatggctggagatttgaacagTTGATAAGTGTCGGTAGTAACTACAATTATGGTAGCGAAGATCAGGCAGAGTTCCTGTGTGTTGTATCAAAAGATGTTACAGATACTGCTGAGCCAAGTGGATCAACAAAACCTACAATTAAACCATCAGACAAAGCACCGACTCAAGTGGCCCAGAAGTTGCTTTATAGAAATACAAATACCATTGAAATGCCCAAGGAGTGCACTTCAAGAATACCATTCAAGTGTCTCCAAGAAATATTGGTTTTACGAATACCTTCACAAGAGTTGTTTTTAAAATGCAGATACCATTCAAGTGTCTCAAAAGTTGGTTTTAGAATACCATTCAAATGTCACAGCAACTTTGTAGAAAACCATTCAAGTGCTAAGAAGTTTTTATCAATGCTGAACTGCTGGTACCATTCAGGAGTGGGTTTTAGAATCCATTCAAGTGTCCAAGTGGTTTGGTTAATTCTAGAAAGCCATTGA

Transcript

alvinactis_v1_g9300

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00781	DAGK_cat	Diacylglycerol kinase catalytic domain	Family	Interproscan
PF02214	BTB_2	BTB/POZ domain	Domain	Interproscan
PF19279	YegS_C	YegS C-terminal NAD kinase beta sandwich-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR001206	Domain	Diacylglycerol kinase, catalytic domain	Interproscan
IPR003131	Domain	Potassium channel tetramerisation-type BTB domain	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR016064	Homologous_superfamily	NAD kinase/diacylglycerol kinase-like domain superfamily	Interproscan
IPR017438	Homologous_superfamily	Inorganic polyphosphate/ATP-NAD kinase, N-terminal	Interproscan
IPR045540	Domain	YegS/DAGK, C-terminal domain	Interproscan
IPR050187	Family	Lipid Phosphate Formation and Regulation	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12358	SPHINGOSINE KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001727	Molecular Function	lipid kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006665	Biological Process	sphingolipid metabolic process	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016301	Molecular Function	kinase activity	Interproscan
GO:0016310	Biological Process	phosphorylation	Interproscan
GO:0017050	Molecular Function	D-erythro-sphingosine kinase activity	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0046512	Biological Process	sphingosine biosynthetic process	Interproscan
GO:0051260	Biological Process	protein homooligomerization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-