Detailed information of alvinactis_v1_g8776 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g8776NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58chr_41517944615199336+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00100Zona_pellucidaZona pellucida-like domainFamilyInterproscan
PF01798NopsnoRNA binding domain, fibrillarinFamilyInterproscan
PF08156NOP5NTNOP5NT (NUC127) domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001507DomainZona pellucida domainInterproscan
IPR002687DomainNop domainInterproscan
IPR012974DomainNucleolar protein 58/56, N-terminalInterproscan
IPR012976DomainNOSICInterproscan
IPR036070Homologous_superfamilyNop domain superfamilyInterproscan
IPR042235Homologous_superfamilyZona pellucida, ZP-C domainInterproscan
IPR042239Homologous_superfamilyNop, C-terminal domainInterproscan
IPR045056FamilyNucleolar protein Nop56/Nop58Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR10894NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0031428Cellular Componentbox C/D methylation guide snoRNP complexInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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