Gene detail

Detailed information of alvinactis_v1_g820 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g820	DNAJ HOMOLOG SUBFAMILY C MEMBER 10	chr_1	13937155	13977613	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g820

ATGCCCAAGTTATACACTAAAAGTCTTTGTTCTCATGCAGACCAGCAGTCATGCTATGCAAACCTGAGGCAGAAAAAAGGAAAATACTTTATTCGTACAAAAGATTACTATGAGCTGTTAGGTATTAGTAGAGATGCTAGTAATAAGGAGATCAGGAAGGCATTCAAGAAGCTTGCGTTACGACTGCATCCCGATAAAAATAAGGAAGATCCTAATGCACATGAATCGTTTCTACGAGTAAATAGAGCATACGAAGTGCTTAAAGAACCAGAGACTCGCAAAAAGTATGACACTTATGGTGAAGAAGGACTTAAAGAGAATCACTTTAGCAATCATTATCAGAGCTGGAATTATTTTAATGAAGAATTTGGTTTATATGATGAAAACTCTGAAATTATAACACTTAGCTACTCAGATTTCCAATTATCTGTTGAAGGCAGTGATGATATTTGGTTTATCAATTATTATTCGCCATTCTGTTCTCATTGTCATGACTTAGCTCCAACTTGGAGAGAAGTCGCACAAGAACTTGAGGGTGTTATTAGAATTGGTGCTGTAAATTGTCAAGAAGATTGGACACTATGTCAACAACAGGGAGTTCAAAGCTACCCATCACTTATACTTTATCCTTCTCAACACCTGTACAGAGGACAAAGAACTGAACGAGCACTTGTCCGATTTGTTTTGGATGCACTTGATGCCAAAGTAGTAGAGTTAACAAAAGACAATTTTGCGACAGAGACATCAGCATCAGATCAGCAATGGCTGATTGATTTCTGTGATCCATCAGGAGATTGTTTATTAGCTGATAGCAAGCTAAAGCTTGCCTCAATAATGGATAATTTAGTACAAGTTGGATCGATCGACTGTTCACATGATGAGGCCTTGTGTACCTCTCTTGGTCACCATGGTGAACTTGTTTACTTCAAAGCTCATAGTTTAGAAGCTCGAAAGGGCATAGTTATACAAAGCTTAGATACAAAAGACATTGTAGATCAGGTATTACAATTAATGCCTGGGCCACAGAACATAGACAACAAGGGATTTCAAGAAATGCGTGAGAAACTAGAAATTGGTGAGCAACCTTGGCTTGTTCATTTTGACAAAGGAGCTGCAGCTGGACTAGAAATCAAAAAAATACCCGGTGTTATAAATGACATGAAGGTTGGTCATGTTGATTGTTCCAATGCAAAGGACCTGTGTGACTCACTCCATGTTACAAAATACCCACGTGTTGCCTTGTTTAAAAGTGGTGGCTTCGAATGGCATCATGGTCGTTTTACAGCACATGATATTGCTGTTTTTGCTAAGGAAAGTGCATCTGCCAATGTACAGACACTTGGTCCAGATGACTTCCCTGGTGTAATCACGCCCAATCGTCCATTCTTTGTTGACTTTTTTGCTCCTTGGTGTCCGCCGTGTATGAAGCTCTTACCTGAATACCGCAAGGCATCACGGTCATTCATTGGAAAACGTAACATTGGATTCGGGACGGTGGACTGTACAGTCCATGTCAATCTATGTCACGTGTATAATATTCATTCATACCCGACTACTATCTTGTACAATAATACGATACCAATCCAGTTTAGTGGGCACCATTCTGCTGGCGACTTAATAGACTTTGTCGAGAATACTCTCAGCCCATCTGTTGTGGAACTGACACCAAATACCTTTGAATCGCTCGTCAGTCAGAGAGACTTTGGCGATACTTGGCTGGTTGACTTCTACGCGCCGTGGTGTGGACCATGTCAAGAGCTATTACCAAACTGGAATAAACTAGCAAAGCGTTTAAAGGGAGATGCACACGTGGGCTCGGTGGACTGTGTCAAACACCGGACTCTCTGCTCAGAGCAAAACATTCGTTCCTTTCCAACTATACGTCTGTATTCACATACCAGTACAGGACCATGGGAGTATGTTGTCCATCAAGGCTGGAGGGATGTAGAATCACTGTATATATGGTCATACCAGCACCTACCCTCGTTAGTGACCGATGTTACGGGTGATATCTTTTATTCTGAAGTACTCAGCAGTGAAGAACCCTGGATGCTGGATTTCTACGCGCCTTGGTGTGGACCGTGTATGCGATTCGCTCCCCATTTCGAAAGAGTTGCAAAGATGCTTGGCGATAAAGTCCGTTGCGGAAAAGTGAATTGTGAGCAAGATTATCATCTTTGCCAACAAGCTGGTGTACATTCCTATCCATCAGTAAGACTTTACATTGGCGCTCATAGTGGATTATCACAGCCTGTTGAAGGAGATGCGTTAGATTCGCAACAGCCAGACGAGATTTTTGAGTTAGTCAAACATGCTTTGGAGGACAGAGAAGAAAAAGAAGCCAGTGACGCCGATAAAGATGACGGCcgagaaccgaaggatgtacgagaagataaggatgacacagaaccaaaggatgtacgagaagatgacagagactacaaagatgaacgagaagaAAAATATGAACCAGAGgaaagagaaggacacgaaagagaagaacacgacagtgaaggacacgaaagagaaggacacgatagtgaaggacacgaaagTGAAAGAGAAGTAGCAGAAGAAAAAGATGAAAGGGAAGAGACTGACGAGGCTGATGACAGAGAAGAAGTTACAGGAGATAGTCACAAAGATGACGATATCATAGGCGAAACTAGGGCTTGTCGAAATGATGTCCAAAAATCTGCTGTTGATTTGTCTGGTAGCTGTGCTGGTTGTGTCTTTGAGCCACGAGTTACCAAGAAATATTGTGCTAACGATCCTGACTACAGTGGGAGGAGGGAGCCACcaggagcccataaTTCTACAAGACTTTTACAAAAGACATTACCAGACATGAGTGAAGAAGTAGCTGTTGATAAAACAGATGATTGCGATAGCATCAATGAGGTAAAAAGTAGTTCTCCAGCTGTAATATGTGAAGTAAAAGAAGAGAAGGACATAGTTGAAGGTTCTGTAGAGAAAAGCACTGATAGTTCCAAAGAAATTAACAAAGAAGATACAAAAATAGACAACCCAGAAGAGAAAAAGGGGACACAAATAGATGATGTAGCTAAACTAGATGGTGATGATGAAGCCAATAAGCAGGAGGAAGATAGCAGACCTAAAGAAAATGCAGTTGATGGTGGGGGAGACACTTCTGAGGATGAAGAACAGTCTGGTTCTGGTGAAGATGATTCTTCATCTGAGTCATTCTCCTCAACAGAGTCATCTAGTGGAAGTGATTATGAAGAAGATTCTGAGAGCGGAGAAGGATCGGATGAAGAGGTGTCAGATAAGGAAGAAGAAAGCAAACCTGAAGTTGAAGGTGACTTTCATGTGAATAGACAAGATGAAGACGAAGAAGATGAAAAACAAGCAGAACCAGACAATGAATGGGTGGAAGAAAGAAAAGATGAAGAAGAGGAAATAAGGAAGGATCCAGCATTTGTTCCACGAAGAGAGACATATTGGACTCATGATGACCGTTGGGATGATTCTCCTAAAGAAATAGATAGACGTCCACCAACAAACCGAAAACTTTGGGAGAAATCTTCAGATAAGTGGAGTCATGATTTATACATTGAGGATGATCAACGACCAAAAACTAAGGAAGAAAGAATGGAGACAGAACGAAACCAGAGAGGAAGATTTGGACGATCAAGAGGTAACAGAAGATATGACCTGCAAGAATTTATAACTAACGATAGAAGTAGAATGCCAAGACAAGGACGTGGAACTGGTAGGTCACCTCGCGATGAAGATCATGAAGAGATGGACAACAGGTCACATAGAAAACAAGAAACACCAGAGGAGAATGTGGATTACCAAAGAGATAATAGAAAATATCAAGACCGAAATGAAAGGAGTTACCAAAGAGGAAGAAGAAGAGAAGAAACCAACTCAAAAAAATGGGAAGAGGAATCAAGAAACTTGGATGAAGATAGTGAAAATAGAATTGATAAAAAACAACATGAAAGAAGAAGGAGAAGAAATGACAACAGGCTGGAGGACAGAAATGAAGAATTTGGCCAACAAGACAGTGATAGACAACAAACAAGTaacagaagagggagaagagaagagatacccgatgatttagatagacaggatagaagagaaagaaacagaagagaggatgaaagaaagaaTGTTCCATCCAGGAGAGAAGATCAGGAGGAGAAGCAAGCGCCGAGAGCTGAGAGAAGTCACAGTGACAGAAATCAAAGGAAAGAAGAAAAAACACAAGACCTCCAGCCATCAGATAAGACGTCACATAGTTACACTCAGACAAGAGGAAGAGGGAGAGGGAGAGGTGTACCTAAAACTTTGAAAACATCAAGGAAAAATGCTGCTGACTTTACGAGGGAGAAAGAACTCGCCagaaaaaagaaagaagaagaaaaagcgatgcaaaaagaagaagaaaagtatgaagATGCAAATGATGATGATGTAGTGGAGAATGGAGATGATCCTACTAATGAACAGTACGAAGAAGTAGAAAAACAATACCAGGAGGAAAATCACGATGAAGAACAAAGACAAAGTCCTGTTGTACTGCCGACAAAACCATCTCCACCCAGTGATGTACCCACAAGTAAACCCAAACGTTATTCCTCACAACGACAACGAGTAACACAACAAAATCCACCACCACCTGTTGAATCCTTCCAAGAGCAACTGGGGCCTGTTATATCTGAAGGACCTTACTACGAACAAATCGGGTACCAAGACATGTATGTGTCACCAACACCACCAGTACAAGGAATGATGGGAGCGGCACCATTACATCATGGAGAGGAAGGTGAGCTGCCTCAAGACATGAGCATGCAACATGGTCAACCACTAGGCCCCCTCCAGCATGAAAGTATGATTCACCAGCGTCTGGCAGCCATGCAACAAGGGGTAATGGCTTCCCAAGAAGGTGGTGTACCACCCAGAATGATGGGACCTATCCCAGGAATGATGGCTCCGCACCAAATGCAGCCACAGCAAGGTCTTCCAACAACAATGATGGCTCCTATGTCCCAGGCTAGCATGCAAAATATCAATCCACAGACTTCCGGATTAACACATATGAGTGTGCACCCGAATTACTCTTCACCTCAAGTTTACCCAGGACCCACAATGATGTACCAAAACTCGCAgtaCCCAATGATGGGCATGAATCCCTTTTTAGCACAACAACAGATGTATGGTATGCAATTACAAGGAAGTGCATATTACACTCAGCCAATGTTTCAGCAGCCAGTAACAGAACAAACAGTTCAACAAAGGCGTAGACCAAATACAGCAATTCCCATAAAGGCTCCATCTtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgttgtgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggtttcttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttctgtgttcggtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttcggtacatcatggttccttctgattgtcatggagttgatgttctgtgttctgtacagtcatggttccttgtgattgtcatggagttgatctgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttctgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggtttcttgtgattgtcatggagttgatgttgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggtttcttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggtttcttgtgattgtcatggagttgatgttgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggtttcttgtgattgtcatggagttgatgttctgtgttctgtacatcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattatcatggagttgatgttgtgtgttctgtacagtcatggtttcttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggtttcttgtgatcgtcatggagttgatgttgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgtttcatggttccttgtgattgtcatggagttgatgttgtgttctgtacagtcatgggttccttgtgattgtcatggagttgatgttgtgtgttctgtacagtcatggttccttgtgattgtcatggagttgatgttgtgtgttctgtacatcatggttccttgtgattgtcacggagttgatgttgtgtgttctgtactttcatggttccttgtgattgtcatggagttgatCTGTGTTCTGTACACCGAGGAATACACAAGGTGTGATTGCTCAGAGAGTGATAAAATGGGAGGATAG

Transcript

alvinactis_v1_g820

Protein

alvinactis_v1_g820

MPKLYTKSLCSHADQQSCYANLRQKKGKYFIRTKDYYELLGISRDASNKEIRKAFKKLALRLHPDKNKEDPNAHESFLRVNRAYEVLKEPETRKKYDTYGEEGLKENHFSNHYQSWNYFNEEFGLYDENSEIITLSYSDFQLSVEGSDDIWFINYYSPFCSHCHDLAPTWREVAQELEGVIRIGAVNCQEDWTLCQQQGVQSYPSLILYPSQHLYRGQRTERALVRFVLDALDAKVVELTKDNFATETSASDQQWLIDFCDPSGDCLLADSKLKLASIMDNLVQVGSIDCSHDEALCTSLGHHGELVYFKAHSLEARKGIVIQSLDTKDIVDQVLQLMPGPQNIDNKGFQEMREKLEIGEQPWLVHFDKGAAAGLEIKKIPGVINDMKVGHVDCSNAKDLCDSLHVTKYPRVALFKSGGFEWHHGRFTAHDIAVFAKESASANVQTLGPDDFPGVITPNRPFFVDFFAPWCPPCMKLLPEYRKASRSFIGKRNIGFGTVDCTVHVNLCHVYNIHSYPTTILYNNTIPIQFSGHHSAGDLIDFVENTLSPSVVELTPNTFESLVSQRDFGDTWLVDFYAPWCGPCQELLPNWNKLAKRLKGDAHVGSVDCVKHRTLCSEQNIRSFPTIRLYSHTSTGPWEYVVHQGWRDVESLYIWSYQHLPSLVTDVTGDIFYSEVLSSEEPWMLDFYAPWCGPCMRFAPHFERVAKMLGDKVRCGKVNCEQDYHLCQQAGVHSYPSVRLYIGAHSGLSQPVEGDALDSQQPDEIFELVKHALEDREEKEASDADKDDGREPKDVREDKDDTEPKDVREDDRDYKDEREEKYEPEEREGHEREEHDSEGHEREGHDSEGHESEREVAEEKDEREETDEADDREEVTGDSHKDDDIIGETRACRNDVQKSAVDLSGSCAGCVFEPRVTKKYCANDPDYSGRREPPGAHNSTRLLQKTLPDMSEEVAVDKTDDCDSINEVKSSSPAVICEVKEEKDIVEGSVEKSTDSSKEINKEDTKIDNPEEKKGTQIDDVAKLDGDDEANKQEEDSRPKENAVDGGGDTSEDEEQSGSGEDDSSSESFSSTESSSGSDYEEDSESGEGSDEEVSDKEEESKPEVEGDFHVNRQDEDEEDEKQAEPDNEWVEERKDEEEEIRKDPAFVPRRETYWTHDDRWDDSPKEIDRRPPTNRKLWEKSSDKWSHDLYIEDDQRPKTKEERMETERNQRGRFGRSRGNRRYDLQEFITNDRSRMPRQGRGTGRSPRDEDHEEMDNRSHRKQETPEENVDYQRDNRKYQDRNERSYQRGRRREETNSKKWEEESRNLDEDSENRIDKKQHERRRRRNDNRLEDRNEEFGQQDSDRQQTSNRRGRREEIPDDLDRQDRRERNRREDERKNVPSRREDQEEKQAPRAERSHSDRNQRKEEKTQDLQPSDKTSHSYTQTRGRGRGRGVPKTLKTSRKNAADFTREKELARKKKEEEKAMQKEEEKYEDANDDDVVENGDDPTNEQYEEVEKQYQEENHDEEQRQSPVVLPTKPSPPSDVPTSKPKRYSSQRQRVTQQNPPPPVESFQEQLGPVISEGPYYEQIGYQDMYVSPTPPVQGMMGAAPLHHGEEGELPQDMSMQHGQPLGPLQHESMIHQRLAAMQQGVMASQEGGVPPRMMGPIPGMMAPHQMQPQQGLPTTMMAPMSQASMQNINPQTSGLTHMSVHPNYSSPQVYPGPTMMYQNSQYPMMGMNPFLAQQQMYGMQLQGSAYYTQPMFQQPVTEQTVQQRRRPNTAIPIKAPSSWFLVIVMELMLCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMLLCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMLCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMFCVRYIMVPCDCHGVDVVCSVQSWFLVIVMELMLCVRYIMVPSDCHGVDVLCSVQSWFLVIVMELICVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMFCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMLCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMLCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMLCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMLCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMLCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMLCSVQSWFLVIVMELMLCVLYIMVPCDCHGVDVVFCTVMVPCDCHGVDVVCSVQSWFLVIVMELMLCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMLCSVQSWFLVIVMELMLCVLYIMVSCDCHGVDVVFCTVMVPCDCHGVDVVCSVQSWFLVIVMELMFCVLYIMVPCDCHGVDVVCSVQSWFLVIVMELMLCVLYIMVPCDYHGVDVVCSVQSWFLVIVMELMLCVLYIMVSCDRHGVDVVFCTVMVPCDCHGVDVSWFLVIVMELMLCSVQSWVPCDCHGVDVVCSVQSWFLVIVMELMLCVLYIMVPCDCHGVDVVCSVLSWFLVIVMELICVLYTEEYTRCDCSESDKMGG*

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00085	Thioredoxin	Thioredoxin	Domain	Interproscan
PF00226	DnaJ	DnaJ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623	Domain	DnaJ domain	Interproscan
IPR013766	Domain	Thioredoxin domain	Interproscan
IPR017937	Conserved_site	Thioredoxin, conserved site	Interproscan
IPR018545	Domain	Btz domain	Interproscan
IPR035674	Domain	ERdj5, C-terminal thioredoxin domain	Interproscan
IPR036249	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR052460	Family	Endoplasmic reticulum disulfide reductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44340	DNAJ HOMOLOG SUBFAMILY C MEMBER 10	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005788	Cellular Component	endoplasmic reticulum lumen	Interproscan
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0015035	Molecular Function	protein-disulfide reductase activity	Interproscan
GO:0016671	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	Interproscan
GO:0035145	Cellular Component	exon-exon junction complex	Interproscan
GO:0036498	Biological Process	IRE1-mediated unfolded protein response	Interproscan
GO:0051787	Molecular Function	misfolded protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-