Detailed information of alvinactis_v1_g7636 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g7636ACYL-COA DEHYDROGENASEchr_33259053932612911+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00441Acyl-CoA_dh_1Acyl-CoA dehydrogenase, C-terminal domainDomainInterproscan
PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 3DomainInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF02770Acyl-CoA_dh_MAcyl-CoA dehydrogenase, middle domainDomainInterproscan
PF05270AbfBAlpha-L-arabinofuranosidase B (ABFB) domainDomainInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF18158AidB_NAdaptive response protein AidB N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000562DomainFibronectin type II domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR001638DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR006091DomainAcyl-CoA oxidase/dehydrogenase, middle domainInterproscan
IPR007934DomainAlpha-L-arabinofuranosidase B, arabinose-binding domainInterproscan
IPR009075DomainAcyl-CoA dehydrogenase/oxidase, C-terminalInterproscan
IPR009100Homologous_superfamilyAcyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamilyInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR036195Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan
IPR036250Homologous_superfamilyAcyl-CoA dehydrogenase-like, C-terminalInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR041504DomainAdaptive response protein AidB, N-terminalInterproscan
IPR052904FamilyAcyl-CoA dehydrogenase-like proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR42707ACYL-COA DEHYDROGENASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003995Molecular Functionacyl-CoA dehydrogenase activityInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donorsInterproscan
GO:0046373Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556Molecular Functionalpha-L-arabinofuranosidase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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