Gene detail

Detailed information of alvinactis_v1_g7275 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g7275	BETA-GLUCURONIDASE	chr_3	27352070	27374330	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g7275

ATGAGTACCACTGAAACTCCAACAAATTCATCCAGTAGTGGCGATCCAAGCAGTCACTCATCACAGAGTCAAACTCAGTCTTCGACTCTTGATACAGTCTCAACACAAGATGTTGTTGATGGCATGTCCGACGGCGAGGATTGCAAAGTTAATCAGACTTGGGGACGGTTATTCCCACTAGGAACTGGCTTCAAGGTGGTTGAACTTGTTGATGATGAATATTCATTTGGTCGTGGGGCTGTAAATAAATATCAGTTTGATGCTAATGATTTCAAGCAAAATCCACATTACCAGGCTTTTAGTACCAAGCATTATAGGCTGTATAGGGAGAAGAATAGCAATGGCACATTTAATACATTTATAACTGACTTGAGCTCCAATGGAACCTTCATAAATCAAGAAAAGATTGGCCGAGATAAATCTCAGGTTTTGAACAATAATGACGAAATAAGTCTATCAGTGACTAAAAATAAAGCATATATTTATCAAGAACTTGGAAAAACTTCTGAAGAGCAGAAAAATCTACCTGACGATTTTAAAGCAAAATATACTATATCAAAAATAATTGGCAGAGGTGCATGTGGCGAGGTGCACCTGTGCTTTGCCAAAGGAACCTGCCAAAGGTTTGCAGTCAAAGTGATCAATAAGAAACAGTTTTCCGTTAACACACCTTCCACAAAAGAGGAAGTGGACATACTTAAGTCTTTGTCTCATCCAACCATAATTTGTATAGTGGATGTATTTGAGACACCAGACAGCCTTTACATTGTACTAGAACTTGTGGAAGGTGGTGAGCTCTTTGATAGAGTCAAGAAAGAAAAACGTTTGGAGGAGCCATCAGTCAAACTACTCTTTTATCAAATGCTGACAGCAGTAAAGTACCTTCATGATAAAAATGTTACTCATAGAGATTTGAAACCTGAAAATGTTCTGCTTGCTTCAGACAAAAGTGATACATTGATAAAGATTACCGATTTTGGTTTATCCAAAATGGTTGGGGAACAGAGTTTGATGAAAACATTATGTGGTACCCCTAGTTATCTGGCTCCAGAAGTACTATCATCAGCAGGTGTAGGTGGCTATTCCAAGGCAGTCGACTGCTGGAGTCTGGGGGTGATTTTGTTTGTATGTCTTGCAGGCTATCCTCCATTCAGTGAAGAAATCAAGCCTTACACTCTTACTCAACAAATTTGTAAAGGCTTGTTCAAATTTCACAAACAATACTGGGATCCTGTGAGCAAAGATGCCAAAGATCTTGTAACTAAGCTACTAAACGTAGATCCATCCAAACGTCTGACAGTTGAAAAGGCATTACAACATCCTTGGATGAAGGACAAGGAAATCATATCTAAGGCAGAGGAATTAATGTTTCCGTCGTATGATGATATGGGACCTCCCAGTCATatttcgtgtaatactgttttaaatcaagTTTCTGTTGCATCTAATCTTTCTGGGATGTTGCGAATCAAAGAGTCAGAGACTCGTGAAGTGAAAGACCTTTGTGGAATATGGAACTTCAGAGCTGACATGTCCCGTCAGAGAAACGCAGGATTTCAAGAAACATGGTTCTCTAAGCCATTATCAAAGACAGGTGAAACAATTCCAATGCCTGTTCCATCCAGTTATAATGACATAACCCAAGACAGATCCCTAAGGGACTTTATAGGATGGGCCTGGTATGACAGAGAGGTTTATGCTCCTAGTTCATGGAGGGACAACAAGACCAGAGTTGTGCTAAGATTTGAAAGTGCACATTATTACAGCATAGTGTGGGTAAACGGCAAAGAAGTTATGCAGCATAATGGTGGCCACCTTCCATTTGAAGTTGATGTTACAAATGACCTTTACTATGATCGAGCAAATAGAATAACAGCAGCTATAAACAACACTCTCACACCAACAACATTACCTCCAGGAGAGATAGAATACCCAACGGGAGGTGATGGGTACCCTCCAGGTTACTTCGTCCAGAAGTACATTTTTGACTTCTTCAACTATGCAGGAATTCATCGCCCTGTCAAACTCTATACCACCTCTGTGGTGTACCTTTCTGACATTACCATCACCACAACCTTCCAAGACAATCAATATGCAGTAGTTGACTTTGTAAGTGTTGTTGGTGCAATTAGCACTGTACCAAGAGATGAGATTGTCATGGAATATCAGTTGTTGGATCAAGATGGCTTTGCCGTGGCTAGTACTGGTGGTAGAGGGCTATTCGAGGGACGGCTGCAGGTGAAGAATCCCATTCTATGGTGGCCAGTAGGGATGAGTAACATAACGGCCTACTTGTATACATTAAAGGTCGTCACTGTTGTGAGTTCTCAAGACTTGACTGATGTTTATCGTATTCCGGTTGGAATAAGAACAGTTAAAGTGGAAGGACCCAAGTTTTTGATCAACAACAAACCGTTTTACTTTAAAGGCTTTGGAAAGCATGAGGATGCTGATATCCGTGGGAAGGGCCTTGACTATGCTATGATCATTAAGGACTTCAACTTGATGAATTGGCTGGGAGGTAATTCATTCCGTACTAGTCACTATCCGTATGCTGAAGAGATAATGGACGTGGCTGACAAACAAGGAATTGTTGTTATCGACGAAGCACCAGCAGTAGGGATTGGCGTCAACAACTACGAAACTAAGAACTTGAAGCATCATCTTGAAGTCATGGAGGAACTGATCCGTCGAGACAAGAACCGCCCAGCGGTTGTAATGTGGTCAGTAGCGAACGAACCAAAGAGCGATATCCTAAAAGCTGCTACTTACTTCAAGCCTATTTTCGATACGACTCGTATACTGGATCCCACAAGACCCGTGACATACGTCACACACTACAAGGCTTGGAACGATAAAGTGAGTCAGTATGTTGACGTCATCTTGTGCAATCGATATTACTCCTGGTACCACGACTACGGCCACACCGAGCTCATTAGTAAACAACTTGAAAAAGAGCTGAGAGACTGGTATGACAAGTTTCACAAACCGGTTGTTCAGGCTGAGTATGGTGCTGATACAGTAGCTGGCTTACACATGGATCCTCCTGTGATGTTTACTGAGGAATACCAGGTTGAAACACTGCAACAGTATTTCCCTGTATTTGACAAACTCAGAAGCGAATTCTTCGTTGGTGAAATGATTTGGAACTTTGCGGACTTCATGACAACACAAGGAATTACTAGAGTTGTTGGCAACAAGAAGGGAATACTTACACGACAAAGGCAGCCCAAAGCAGCGGCTTTTATTCTTCGCCAAAGATACCTTAACATAAAACTCGAACAAACTCCATCAGGCACTGGGGACGACTTACTGGATGCCCTTATTAAGTTTGAGAGCCGAACGCCATCAGCCACTGCAGCAACTCAAGCTATTTATAGTCAAGGCCGAAAATGA

Transcript

alvinactis_v1_g7275

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00498	FHA	FHA domain	Family	Interproscan
PF00703	Glyco_hydro_2	Glycosyl hydrolases family 2	Domain	Interproscan
PF02836	Glyco_hydro_2_C	Glycosyl hydrolases family 2, TIM barrel domain	Domain	Interproscan
PF02837	Glyco_hydro_2_N	Glycosyl hydrolases family 2, sugar binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR006101	Family	Glycoside hydrolase, family 2	Interproscan
IPR006102	Domain	Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich	Interproscan
IPR006103	Domain	Glycoside hydrolase family 2, catalytic domain	Interproscan
IPR006104	Domain	Glycosyl hydrolases family 2, sugar binding domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR023230	Conserved_site	Glycoside hydrolase, family 2, conserved site	Interproscan
IPR023232	Active_site	Glycoside hydrolase, family 2, active site	Interproscan
IPR036156	Homologous_superfamily	Beta-Galactosidase/glucuronidase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10066	BETA-GLUCURONIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0004566	Molecular Function	beta-glucuronidase activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0019391	Biological Process	obsolete glucuronoside catabolic process	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-