Gene detail

Detailed information of alvinactis_v1_g7060 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g7060	COPPER AMINE OXIDASE	chr_3	24149734	24158093	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g7060

ATGACAAAGAATCCCGTTACAATCATAATCATCGCCGTTTGTTTTTTGGTGATACTCTGCATCGCTCTCGTGATAGCTCTTGCCATTGTTGTTCATCAAGACCATGGCAGCTCCAAACGTGATATTCACGAATGCCCCATCGGTAGAAATGCGATGCCACAAGTTGAACTCGATGGTCGACATGGAATTTTTGATGACTTGACTGCGAAAGAGATCATAGCAGTTCGCGATTTCATCCTTCGAGAGACTTCACTCAACGTGACTCCTTTTGAAAAGGCAACGCTTGCCACAAATTACATCTACCTCATCGAACTGCAACAGCCACCTAAAGATTTAACGCTTCAATACCTCGATAATAGTGGGCCCAAGCCTGTTCGAAAAGCCAAAGTGATTGTCAACAGAGGTGGCGACGGTGTTCCCGTCGTCCAAGAGTACATCGTGGAGCCGACAGACAAACCCATCAAGTACACAAAACTGGGACACCCTATTCCTTTTCACAAAAGGGTTTTGGATAGCATCCAGTATCGTATCATTGGGAAGATGGTGGTCAGTCTAACTAAACAGATTCACAAACTTCTCCTAGAGAGTTACGACGGGTACACCTATGATAACTGTACTGATCGATGTTTGACTTGGACTGACACTCAACCTGCAGCTTTACAAAGCGGCCAGCACAAGACATGGATTTGGTTTGTGCGTGACATACCAGGTATGTACATTCATCCTGTGAGTTTGGAAGTATTATTTGATTGTCCTGGTACAGACTCAGCTCTATGGAAAGCCGAAATGATCTACTATAATAACCAGACCTTTGATAGTGCTGAGCGACTAATGACTGCCTACAATTGGGGGTCTATTCAGAAGGTGTTTTTAAAAGCCCCTAATGAGAAAGAGGCCATCTACTCGACGTATCAGCGAAGGGGAGTGCCCCAGCCACCCAAGCCCGCCAGGGGTCCGCGTCTGTTCGAGCCCGATGGAAAGCGCTACTCTGTTCAAGGCCGTCATGTAGAATACATGGGCTGGAGTTTCGATTTTCGAGTTCGATCTTCAACTGGAATGCAAATTTTTGACATCCAGTTTCAAGGAGCTCGCATTGTTTACGAGTTAAGTCTTCAAGAAGCAGCTGCATTTTATTCAGGATATTCACCCATGCAGATGTTCACCGACTACCTAGATAGCGCGTGGGCCATGGGTTCAAATACCTTTGAACTTGTTCGTGGAGTGGACTGTCCCGAGTCAGCCACCTTCGTGGACCTCATTCATCATGTCGACACACCTCGACCAAGAAGAATAAAAAATGCCGTGTGTATTTTTGAGTTTAACACAGGAATAGCCTTAAGACGTCACTTTGAGAATGACTTACGAGGTGGCTATGAGTTCTACGGTGGGATGCCTTCCTACGCGTTAGTCCTTCGTTATGTCTCCACTCCATTCAATTACGATTACATGTTTGACTACATATTTTACAATAACGGAGTAGTTGAGGTGCGCGTTGCAACTTCCGGTTATATACAAGCAACGTACTGGACAGCTGAGGAATCCTCCTATGGACAGGAAGTTCACAAAGATGTGGCTGGAACGATCCATGATCACCTTTTCAATTTCAAGGTTGACTTGGACGTGGCCGTCAGGAAGAATTCTTATCAGACGATAGATTTCGAAAGGGAAACTATAGTGAACCCTTGGTTTCCTTCACTGAATCGCACTCAAAAGGTTGTTCGTCGTCGTACCAAAAACACAGAACAGGAAGCTCTGTACAAGTATAACTTCGACCATCCCAAATACCTCAACTTCTTCAGCGAGACCAACCTGACGAAGACTGGGCTTCCTCGTGGCTATCGCATTCAACTACGTGACGTCATGAAGCAGATTTACCCAGAATCCCTTCCTCTCATGAACTCGGCCAAGTGGTCTCTTCACCAACTGGTCGTCACCAAGTACAAAGAAAACGAGACATGTAGCAGCAGCATGTATAACCAAATTGATCCCTACAGCCCTGAGGTGGATTTTCAAACGTTCTACGCTGACAACGAGAACATTCGAAATGAGGACCTGGTTGCCTGGGTAACGGTGGGGCTCATGCACGTGCCTCACACGGAAGATATGCCAAATACGGCATCGGCGGGAAACACAGCCAGCTTCTTTTTACGTCCATACAACTTCTTTGAGGAAGATCCTTCGATGGGCTCAAGTGACGCCGTGCTGATCAAGCCCAAGGATAAGAATTTCAGCGGATTCAAAGTTGAGAGGTTCGGGACGCCAGACGGTCCAACTTGCATGCCTACGGAAACTCCTTTTGAGTTTACTGGTACTCGCGGTTTTGATTAA

Transcript

alvinactis_v1_g7060

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01179	Cu_amine_oxid	Copper amine oxidase, enzyme domain	Domain	Interproscan
PF02727	Cu_amine_oxidN2	Copper amine oxidase, N2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000269	Family	Copper amine oxidase	Interproscan
IPR000771	Family	Fructose-bisphosphate aldolase, class-II	Interproscan
IPR015798	Domain	Copper amine oxidase, catalytic domain	Interproscan
IPR015800	Domain	Copper amine oxidase, N2-terminal	Interproscan
IPR016182	Homologous_superfamily	Copper amine oxidase, N-terminal	Interproscan
IPR036460	Homologous_superfamily	Copper amine oxidase, catalytic domain superfamily	Interproscan
IPR049947	Conserved_site	Copper amine oxidase, copper-binding site	Interproscan
IPR049948	Conserved_site	Copper amine oxidase, TPQ-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10638	COPPER AMINE OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005507	Molecular Function	copper ion binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0008131	Molecular Function	primary methylamine oxidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0009308	Biological Process	amine metabolic process	Interproscan
GO:0016832	Molecular Function	aldehyde-lyase activity	Interproscan
GO:0048038	Molecular Function	quinone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-