| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g6806 | LIM DOMAIN KINASE 1 | chr_3 | 21279516 | 21288047 | + |
| CDS | |||||
| alvinactis_v1_g6806 | |||||
| Transcript |
| alvinactis_v1_g6806 |
| Protein |
| alvinactis_v1_g6806 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00412 | LIM | LIM domain | Domain | Interproscan |
| PF00595 | PDZ | PDZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001478 | Domain | PDZ domain | Interproscan |
| IPR001781 | Domain | Zinc finger, LIM-type | Interproscan |
| IPR011009 | Homologous_superfamily | Protein kinase-like domain superfamily | Interproscan |
| IPR017441 | Binding_site | Protein kinase, ATP binding site | Interproscan |
| IPR036034 | Homologous_superfamily | PDZ superfamily | Interproscan |
| IPR050940 | Family | Actin-regulating Serine/Threonine Kinase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46485 | LIM DOMAIN KINASE 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004674 | Molecular Function | protein serine/threonine kinase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0030036 | Biological Process | actin cytoskeleton organization | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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