Gene detail

Detailed information of alvinactis_v1_g4740 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g4740	PROTEIN SON	chr_2	30343337	30351962	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g4740

ATGGAGGCTGTTGTGGACGAGGAGAGAGCTCAAGTCGAAGAAAAAGATGCCGGGAAGTCTGAAGACGACGAGCCTTCATCGCAAAAACGATCAAAACACACCAAGaaacataaacacaaacattcgaaaaagcacaagcataaacacaaaAAGCGTAAAAACAAGAGGAAATCTTCTTCACGGTCAGGATCGAGGTCGTCAAGTCGTTCTCGCTCGAGATCTCGCGAATCTGATGGATTGAAAGACTCTGACGATTCCAACTTTGAAGCCTCTTGCCTGGTGAACTCGGAGGATTTTGGATCTTTTAAGCTGACAAAGTCAGTTTCAAGATCAAGGAGTCCTAGTCCTTCAAGTAATAAGGTATCAGGTGTGAAGGAGCTTGAAGTCAATTCCAAGTCAAACTTTATACCAGCATTTTATTCTGATGCTGTCAGAGAAACCCAGAGTAGAACTACATGTAGATCAAGAAGCAAGTCGGAGTCACCCCCATTTTATACCCATTCTGACTTAGAAAATAAAGCCAGGAATCTTGCAAGGAGCAAGTCAAAATCTCCACCTTTTTATACAGCAGCTGATTTAGAGGAGAATGACAAAGAGCATTCAAAGTCTGAATCACCAGCATTTTATTCTCAGAATGACGTTGAAAGCATGAGCAATTTAAATCCCAAACCCAGTTCAAAGTCAGAGTTCAAGTTGAACTGTCATTCCAGCACAGAAGACACAGAAAAATCCAGTTCAGTAGCAAAAGAGATTGAATCTAAGAAAAATAGACCAAAGGTCTCCGACAAGAGGTCACGGTCAAAGTCATCTTCTAGGTCTCTATCACCAAAGTCACACAGAAAGAAGAGAAGTGCAAGTCGGTCGAAGTCCAGGAGTAAAAGCCCAAGGAGTAAGCGTGAAAGAAAGTCTCGATCAAGATCTCCATCTCGTGAAAAAAAGAAGTCGAGTAAAAAGTCAAGATCTAGAAGTAGGTCTTCACGAAGTCGAAGCAGGTCTCCCAGGAAAAGTTCAAGAACGTATCGAAGTAGAAGCCGAGATCAGAAAAGGAGTAGGAGCCCTGTGCAAAGATCTAGAAGGTCACACCGCGATTCTTCACCAAGAAGGAAACTTAGAGACTCTTCATATAACAGACAAAGTTCAAGAAAACAACGTAGTAGTTATAGGAGATCGCGATCAAGGTCACCGAAGAGACATTACTCAAAAAGGTCACGATCAAGAACTCCTCAGCGAAAGCTTCGTAGGAACAGCAGTCGCTCAATATCACCTAGACGAGGCAGATCAAGGTCTCCTAGGAATAAATCATACAGACGTAGAAGCCCATATAAATCACGGTCTAGAAGGAGTAGATCAAGATCTTACTCATCAAGAAGGAGAAGTCGTTCTAGATCAGAATCAAGGGATCGATCAAAAAGGAGGTCGAGATCCAAATCAGCTGATGCAAGCCACGACAAGAACACAACAGTAGGAAACAAGGATACATGTACGTCATCAGTAACCAAGGCTAAAGATTTAGTAGGCAAAGCACCAACAGTCACCGATCCATCTAATAAAAGATCACTAGCCCAACTCACTGAGTTTTGTAAAAAGTTAACAGAGGCCAGAGGTATAAAAAAGGAAAGTGATGGAAATCAGATGACTGCGAATGAGGTGAAAGAAGATGTGGAAGATGATAACCCAGTATCAATATCACATCCCTTCCTGGTTGCACCGAAGAAAGACATAACCATCCCTCAAGTGATATTTCCTGTAAAGCCAATGTTACCACCAATCAATATGGTAGATTCAAATAAACCTCTAACTGAACAGTTCCCTGTGTCTTGTGGGACAAAACACCACGAGAAAGAATGGGAGGGTCTTTCTACTGAAGTAATCCCCGACATTGATGGATCTGCCGCATTACAACCACAAACAGTATTCCAACAGCCACAGATACAAGAGAAATTAGACATCAGTAGTTTGGTTGTCAAGAGATTGGATGCCCAACGAAGACTGCAGACCAATCCCAATGACATCGATGCCATGCTTGCTCTACAAGAAATAGAGATGAAGCTCAATAACTGGTGTCAGTCTAATGTTAAACCAGGGCAGTTTACAGGGCAGTTGGTTAAGCAGATGATGCCCAAGGAGAAGTTTAACACAGGATATCAAGCATGGGCCAGAAAGGACATGTTCCACAATCTAAATCCTGTAAGTGGAGGTATTGGAATGATACTGCTGCAGAAGATGGGCTGGGAACCTGGTAAATCTCTGGGAAAGAGAGGAGAGGGCATGGTAGAACCCATTGCTCTAACGGTCAAAGTTGACAGAAAGGGCCTGAGCTCTACTGCAGATAAACCAGTGGGCAAGAAAGCAATTAGCAAAGCTCCCATGGATTTGCAAGATAACACATACATTGCACatacagtcattctcaaaaagattgtccagatgaaaagactacaataa

Transcript

alvinactis_v1_g4740

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01585	G-patch	G-patch domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000467	Domain	G-patch domain	Interproscan
IPR032922	Family	Protein SON	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46528	PROTEIN SON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0043484	Biological Process	regulation of RNA splicing	Interproscan
GO:0048024	Biological Process	regulation of mRNA splicing, via spliceosome	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-