| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g4667 | COLLAGEN ALPHA | chr_2 | 28939826 | 28968687 | - |
| CDS | |||||
| alvinactis_v1_g4667 | |||||
| Transcript |
| alvinactis_v1_g4667 |
| Protein |
| alvinactis_v1_g4667 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00088 | Trefoil | Trefoil (P-type) domain | Domain | Interproscan |
| PF00092 | VWA | von Willebrand factor type A domain | Domain | Interproscan |
| PF00188 | CAP | Cysteine-rich secretory protein family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000519 | Domain | P-type trefoil domain | Interproscan |
| IPR002035 | Domain | von Willebrand factor, type A | Interproscan |
| IPR014044 | Domain | CAP domain | Interproscan |
| IPR035940 | Homologous_superfamily | CAP superfamily | Interproscan |
| IPR036465 | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| IPR044913 | Homologous_superfamily | P-type trefoil domain superfamily | Interproscan |
| IPR050525 | Family | Extracellular Matrix Assembly and Organization | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24020 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| - | - | - | - |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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