| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g3980 | POLYCYSTIN FAMILY MEMBER | chr_2 | 17823403 | 17884964 | + |
| CDS | |||||
| alvinactis_v1_g3980 | |||||
| Transcript |
| alvinactis_v1_g3980 |
| Protein |
| alvinactis_v1_g3980 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00041 | fn3 | Fibronectin type III domain | Domain | Interproscan |
| PF01477 | PLAT | PLAT/LH2 domain | Domain | Interproscan |
| PF01825 | GPS | GPCR proteolysis site, GPS, motif | Motif | Interproscan |
| PF02010 | REJ | REJ domain | Family | Interproscan |
| PF07645 | EGF_CA | Calcium-binding EGF domain | Domain | Interproscan |
| PF08016 | PKD_channel | Polycystin cation channel | Family | Interproscan |
| PF12662 | cEGF | Complement Clr-like EGF-like | Domain | Interproscan |
| PF14670 | FXa_inhibition | Coagulation Factor Xa inhibitory site | Domain | Interproscan |
| PF20519 | Polycystin_dom | Polycystin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR000203 | Conserved_site | GPS motif | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001024 | Domain | PLAT/LH2 domain | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR002859 | Domain | PKD/REJ-like domain | Interproscan |
| IPR003915 | Family | Polycystic kidney disease type 2 protein | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR009030 | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR013122 | Domain | Polycystin cation channel, PKD1/PKD2 | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR014010 | Domain | REJ domain | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR026823 | Domain | Complement Clr-like EGF domain | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR036392 | Homologous_superfamily | PLAT/LH2 domain superfamily | Interproscan |
| IPR046338 | Homologous_superfamily | GAIN domain superfamily | Interproscan |
| IPR046791 | Domain | Polycystin domain | Interproscan |
| IPR049883 | Domain | NOTCH1 EGF-like calcium-binding domain | Interproscan |
| IPR051223 | Family | Polycystin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10877 | POLYCYSTIN FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005262 | Molecular Function | calcium channel activity | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0050982 | Biological Process | detection of mechanical stimulus | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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