Gene detail

Detailed information of alvinactis_v1_g365 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g365	SUGAR-1-PHOSPHATE GUANYL TRANSFERASE	chr_1	6665452	6691742	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g365

ATGGATATCGAAGAGTTAAGGACTCCAGCTTTATTGGTGGATATAGAAAAAGTGAAGATAAACTGTCAAACTATGGTTGAACGATGTAAAAACCTTGGTGTTCAGCTTAGACCGCATATGAAAACGCACAAAACACTGGAAGCTGCTTACTTCATGACAAATGGTACTAAAAGATGTATTGTTGTATCAACTCTTGCTGAAGCAGAATTCTTTGCCGATGGAGGCTTTGACGACATCACTTATGGTTATCCAATAACACCTGACAAGCTCCCACAAGCTTCAAAACTATTGGAAAGATTACAGAAATTCCACATCTTTGTTGACAATGATTTCACTTTAAAAGCACTCATAAGCTATCCACCCCCCCAAGGGAAGAAGTGGTCAGTGTTTATGAAGGTAGACTGTGGTAATGATAGAGCTGGAGTGCACTGCAATGATCCGTATTGCATAACTCTTGCCAAGGCGATTACAAATGAACCATCCCTGGTCTTTAATGGTCTATATATTCACTGTGGAGATTCATATTCTGCAAAAAGTGCAAGCCAACTAAGGGATTGTGGCAGTAGTTCTTGTGACAGGATTCTTGGACTGGTTTCAAGGCTAAAAGCAGCTGGCATTGAGTGCCCTACTGTTGGAGTGGGGTCTACTCCTAATTGTTCAAAACCAGTAAAAGATATACAAGGAATTACTGAGTTTCACCCAGGAAATTATGTCTTTTATGATTATCAACAATCATTAATTGGTTCTTGCCAGCTAGAAGATGTTGCGATGAGAGTGCTGACTAGAGTAATTGGACATTATCCAGATCGTGGTCATTTACTTGTTGATTGTGGCTTCACTGGTCTCAGTCATGATGGTATCATGCGACAATCACTGTCTCAAGACCCGTTTTGTCTTATTGATGGACATCCTAACCTCAAAATGGTTGCATTGACTCAAGAAATAGGCAAAATAAAAGCAGCAAAAGATGACGAGGCCCTTGACTATTCTAAGTACCCCATTGGTTCATTCTTGTGGATCATACCATATCATATTCCAGACCTAAGAGAGGTGATATTAATAGGATTTTATCAGTCCAGCGAGCCATTATCAAAGTTTATTGCCTCAGCACAACAAGAATTTGGAATAAGCATAAGGTATCTTCAGGAATACCAGCCTCTAGGAACTGTCGGTGGGATCTACCATTTCAGAGATCAAATATCATTTGGAAATCCAGAAGGGTTAATTGTCATTAATGCAGATATTAGCTGCGACTTTCCTTTTCAAGAACTTTTAAAGTTCCATAAAAGTCATCCTGGCAAACATACAATCATGGCCACAGAGGCAAACAGAAAGCAAGCTCAGAATTATGGTTGTTTGGTAGAAAAAGAAGACTGCCATGAGGTTGTTCACTATGTTGAAAAACCAGAGACATTCGTCAGTGAACTCATCAATTGTGGAGTGTATGTGTTTTCACCAAATGAGGTGTTTCAAACGATGAGTGAACTTATGAAGCAGAAGTTTGAAAATGCACAAAATGATACATTCCCATCTGGTCCTGAAGTACTTAGGATGGGTGAGGACTTAATGACACACCTAGCAAATACTGGTGAACTGTTTGTATATAAGACAAGTAACTTTTGGACTACCATCAAAAGTGCTGGGTCAGCCATATATGCCAGCAGAAACATTCTTGAATTGTACCACAAAGTGCACCCAGAAAGACTGGCAAAACATAGCTTTGGAAAACCTACATTTATTGGTGATGTTTATGTTCATCCAAGTGCAGTTATAGACTCTACTGCTGTTCTTGGTCCAAATGTTTGTGTTGCAAGTGGAGTTGTTATTGGACCAGGTGCTAGAATTAGAGAATCCATTATTCTAGATGGTGCTGAACTCAAGGACCATTGCTGTGTTCTTTATTCTATTGTTGGATGGAACTGCACACTTGGTCAATGGTCAAGAGTGGAAGGTCATCGCTGTGACCCAAATCCTAATGACCAGTTTGCACGACCTGATGGAGAATCTCTATTTGGTAGTGATGGAAAACTAACACCGTCAATAACAATTCTAGGTTGTAATGTAGCAATCAATCCAGAACTCATTGTATTAAATTCAATTGTTCTACCTCACAAGGAACTCAGTCAATGCTACAAGAATGAAATCattttatag

Transcript

alvinactis_v1_g365

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00483	NTP_transferase	Nucleotidyl transferase	Family	Interproscan
PF01168	Ala_racemase_N	Alanine racemase, N-terminal domain	Domain	Interproscan
PF14031	D-ser_dehydrat	Putative serine dehydratase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001608	Domain	Alanine racemase, N-terminal	Interproscan
IPR005835	Domain	Nucleotidyl transferase domain	Interproscan
IPR018357	Conserved_site	Hexapeptide transferase, conserved site	Interproscan
IPR026956	Domain	D-serine dehydratase-like domain	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR029066	Homologous_superfamily	PLP-binding barrel	Interproscan
IPR042208	Homologous_superfamily	D-serine dehydratase-like domain superfamily	Interproscan
IPR050486	Family	Mannose-1-phosphate guanyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22572	SUGAR-1-PHOSPHATE GUANYL TRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0016740	Molecular Function	transferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-