Gene detail

Detailed information of alvinactis_v1_g352 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g352	MIXED LINEAGE PROTEIN KINASE	chr_1	6439445	6469015	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g352

ATGGCGGCATATAGTAAGGGACGTCTTCTGTTACAGGGTCGGTTTGCTTTAGTAACGGGAGGAGCCAGTGGAATTGGAAGAGCTGCATGTGAAACTCTGGCTAAAGAGGGAGCAGTTGTAGCAGTTGTGGATAGAGACATCAGTGGTGCACAAGAGACTGCAGCAAGTCTCCAAGATAATAACAATGTGAAGCATTCATTTTACTCTGTTGATGTCTCTTCTTCTGATCAAGTTGAAAGTCTAATAAAACAAATGATCAGAGAGTATGATAGAGCTCCTTGTATTCTTGTCAATTCTGCTGGTATTATAAAAGATTCACTCTTTCTAAAAATGAGGGAGGATGATTTTGATCAAGTTATTAATGTAAATCTCAAGGGAACCTTCTTAATGTCACAATACACGTCAAAAGCCATGGTGGAAAATGACGTAAACAATGGCTCCATCATCAACATAGCCAGTATTGTTGGGAAGATGGGAAATATTGGTCAAGCAAACTATACCGCATCAAAAGCAGGAGTAGAAGGATTAACAAAGACCTGTGCTCTTGAACTTGCAAGGTTTGGCATTAGATGTAATGCTGTTCTTCCTGGATTTATAGACACACCTATGACAAAAAAAATCCCAGAGGAAATCAAAAGCCATGTTGTTGGAATGATTCCTTTAAACAGAATGGGACAACCATCAGAAATTGCGAATGTTATCAGTTTTCTGGCATCAGATCTAAGCAGCTATATAACTGGTATCTCTATTGGTGTGACTGATCTTGATGTCAAAGAGTCAGTAAAGCACCTCGACGGCCATCTGTGTCAGAACTACAACAAAGAGCATCCAAGAAGACACTTTACTGGCATGCAAAAACAGATTCTTCAAAGGTACTTCGATGAGAACATTCATCCCCGTCACCACCCCTCTAATGACCCCTCTGATGAGCTCGTCAAGAAGACAGGACTACGAAAATCACAAATAAAGAGATGGTTCACGAATCGCCGAGCAAGTGTCCGAAGAACTTTACGCAAAAACCAAAGTAAAGAAAGTCATCATAGCACCGGCATGGATCCTTCAACTGTTACCATGACGACACACTACCCGGCAATTGGAAATTTCCCGCCAAATCAAGCTGTGGAATCCGCCATGTGTAGATACTGGATTCCAAGTCAAGGACATGATTCTGCAACTTTTCCCTTTTACTATTTGGAAGCAAAAGAACCAGAGACGTCTTTCTCTCATTTTTCTGGTCTAGAGGCGTTAAATCCACAGAAGCGAGAATTACTAGAGGCAAGATTTTCTGCGCCAAGGCCTTTAAACCAAGATTCTCAACTCAGTAATGCATCATCTGCAGGGAGTGAAAAGGATGTGGATCAGGTTACACCTGGGAGTAGATCTGACAAATGTGTGGGAAGGAAAAGAAAGGCCCAAACTGAAGCAGACTCTCCTAATATGTCTAAGACTGGTCGTCCTGACTCACAAAATGTGAAGATAACAGAGTATTTCAAGCAAAATGATCTCAGCCAGTCAAGAACCAGAAGTCCTCAGAACCTTCTTCCATCTTTTAATTCTCTGTGTAAAATTGAAAGTTCTAGCATGAATATGGTTGGCAGTCAAATATCAGTTGTCCATAACAACCAAAACAGTTTAATTGATGTACCTAGAGAAGATGATCTAGAGTGTATCAGTGTTCACGAAGCATGCCAGACATCTTTGACTTTAGTATCTATAAAGGAAATGGAAGAGAAAGTGTCATCAGGAGCACAGTCATCTCAGATAAAGGACAGCACCATTGACGAACTTAGAGTGGTTATTGAAGACTATAAACAACAATTTGAAAAGCAGAAGCTTTTAAACACGAAGATGGAAAATAGTCTCAAGAAGTGTATGAATGTGAACAAGGAGCTTTTAATCACTACTTCAACCAAAGACAAAAAAGAAGTAAGAGATAGATGCAGAAAAAACAAGTTTCGATTGGGTCAATTTATACCTATTCGGCAAGGAGCGCACTATAGCGAATCGTGGAGAGATGGACATGCCTTCAGAGAACTAAATGAGCAACAAGAAAAACTTAATCAGCAAAAAGAAGAACTTGAAAAACAGAAAAAACTTTTATTGAAGAAAAAGCCTGGCAACTCAGCAAACAAAGAAAGAAAAGGATCAAAAAATACTACTGACAGTGATTCGTTCCCAAGACCACTCTCTCCCATCTTGTCATCAAGTGAATATTACGAAAGAGAGGAGATCATGAAACTAAGAGCATTAGCTTTGAAAAAGGAAGAATCAGATTTACAACTTGAGTTTGAAAAACTTGACAAACAACGCAACCTGCACGTGAGAGAAACTAAGAgaatacataatgaggatgagtcaagGTTCAACAATCACCCTCAACTCAATGGTCGATATTTACTTTTAAATTTACTTGGTAAAGGAGGATTTAGTGAAGTGTACAAGGGATATGACTTGTTTGAACACCAGTACGTGGCCTGTAAGATACACCAACTAGTGAAAGAATGGAAGGAAGAAAAAAAGAAAAATTATATAAAACATTCTGTACGAGAATACAATATACACAAGACACTAAACCATCCAAGGATAGTGCGGCTTTTTGATGTGTTTGAGATTGATAATGACACGTTTTGTACGGTAATGGAATATTGTGATGGCCAGGACTTGGATTTCTTACTGAAGCAACATAAAATAGTTCCTGAACGAGAAGCCAAGTCCATCATCATGCAGATGGTCAGTGCACTAAAGTATCTCAATGAAATCAAGCCTCCTGTTATTCATTATGACCTTAAACCAGGTAATATACTGTTAGTAGGCAAGGGAGCACTGAGTGGTGAGGTCAAAGTTACAGATTTTGGTCTTAGTAAAATATTTGAGAATGATGGTGACGACAGCATGGAATTAACATCACAGGGAGCAGGAACATACTGGTACCTCCCCCCTGAGTGCTTTGAGATTGGTAAACAACCTCCGAAGATATCATCCAAGGTTGACGTCTGGTCTGTTGGAGTCATTTTTTTTCAAATGTTATTTGGAAAGCGGCCATTTGGTCATGATCAAACCCAGGCCTCAATTCTGGAGAATCGTACGATACTGAAGGCAAAGGAAGTAGAGTTTCCTAACAAACCTGTTGTGAGCAATGAAGTCAAGAGCTTTATGCGGCGATGTCTATCTTATCGAAAAGAAGATCGAGTGGATGTACTTTCACTGAGTGAAGACAGTTACCTAAGGCCACCCAGCAAAAAGTCCTCATCATCCTCATCACAGAATTCTCACAGTAGCTTATCATAG

Transcript

alvinactis_v1_g352

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF13561	adh_short_C2	Enoyl-(Acyl carrier protein) reductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR002347	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22974	MIXED LINEAGE PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007059	Biological Process	chromosome segregation	Interproscan
GO:0018105	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-