Detailed information of alvinactis_v1_g3225 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g3225ATP-DEPENDENT DNA HELICASEchr_268833796902561-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF05970PIF1PIF1-like helicaseFamilyInterproscan
PF14214Helitron_like_NHelitron helicase-like domain at N-terminusFamilyInterproscan
PF20209DUF6570Domain of unknown function (DUF6570)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002394FamilyNicotinic acetylcholine receptorInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR010285FamilyDNA helicase Pif1-likeInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR025476DomainHelitron helicase-like domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR046700DomainDomain of unknown function DUF6570Interproscan
IPR051055FamilyPIF1 DNA helicaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47642ATP-DEPENDENT DNA HELICASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0022848Molecular Functionacetylcholine-gated monoatomic cation-selective channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0045211Cellular Componentpostsynaptic membraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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