| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g3133 | FLAP ENDONUCLEASE FAMILY MEMBER | chr_2 | 5558732 | 5571323 | + |
| CDS | |||||
| alvinactis_v1_g3133 | |||||
| Transcript |
| alvinactis_v1_g3133 |
| Protein |
| alvinactis_v1_g3133 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00536 | SAM_1 | SAM domain (Sterile alpha motif) | Domain | Interproscan |
| PF00867 | XPG_I | XPG I-region | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001660 | Domain | Sterile alpha motif domain | Interproscan |
| IPR006084 | Family | XPG/Rad2 endonuclease | Interproscan |
| IPR006086 | Domain | XPG-I domain | Interproscan |
| IPR013761 | Homologous_superfamily | Sterile alpha motif/pointed domain superfamily | Interproscan |
| IPR029060 | Homologous_superfamily | PIN-like domain superfamily | Interproscan |
| IPR035983 | Homologous_superfamily | HECT, E3 ligase catalytic domain | Interproscan |
| IPR036279 | Homologous_superfamily | 5'-3' exonuclease, C-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11081 | FLAP ENDONUCLEASE FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004518 | Molecular Function | nuclease activity | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0017108 | Molecular Function | 5'-flap endonuclease activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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