Detailed information of alvinactis_v1_g31031 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g31031NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2chr_1767065356742596+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF02854MIF4GMIF4G domainRepeatInterproscan
PF04050Upf2Up-frameshift suppressor 2 RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR003890DomainMIF4G-like, type 3Interproscan
IPR007193DomainUp-frameshift suppressor 2, C-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR039762FamilyNonsense-mediated mRNA decay protein Nmd2/UPF2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR12839NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005844Cellular Componentobsolete polysomeInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0035145Cellular Componentexon-exon junction complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP