Gene detail

Detailed information of alvinactis_v1_g30755 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g30755	METALLOPROTEASE	chr_17	2963134	2984163	+

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g30755

ATGGAGTATTCTCGTATATTTTTGAAAGTTGTTGCATGTTACATCACGTCTTCACGATCTTTTCACCTCTCATGTCCGCAGGGAAAAGCCGGTATTTTAGCTTGCAACAGAAACCAGAGCTCACACGCTCTTTCTTATGAACAGTCTTTGTATAATGTACCTGAAACTAAGGTAACTATTTTATCAAATGGTTTGAAAGTTGCCACTGAAGATTCTGGAATCTCTACAGCGACGGTTGGCCTGTGGATTGATGCTGGAAGTAGATTTGAACATGAGAAGAACAATGGTGTGGCACATTTCCTTGAACACATGGCATTTAAGGGAACAAAAAAGAGGTCACAAGTTGACCTTGAACTTGAAGTAGAGAATATGGGTGCCCACTTGAATGCCTATACGTCAAGAGAGCAGACTGTTTATTATGCTAAGGCATTCAGTAAAGACCTTCCACAAGCTGTTGATATCCTGGCTGACATCACACAAAACTCTGTTTTTGGTGAGGCTGAAATTGAAAGAGAACGAGGTGTTATTCTTCGTGAAATGCAGGAGGTTGATACCCAGTTAGAGGAAGTAGTGTTCGATCACTTGCATGCAACAGCCTTCCAAGGCACACCTTTGGGTAGAACTATATTGGGACCTTCACAGAATGTCAAGAGTATAACCCGTAATGACTTAGTGGAGTATATCAACAAACATTATAGTGCACCAAGAATAGTTCTCTCTGCTGCTGGAGGTGTCAATCATGACGAGCTAGTTAAGCTGGCAGAAACTCATTTCAGTGGCTTACGATCGACTTATGAGGAGCAAGACAAAGTAGAAACATGTAGATTCAGTGGTAGTGAGATCCGTGTTCGTGATGATGATATGCCTCTTGCTCATGTTGCCATTGCTGTAGAGGGTTGTGGATGGACTCATCCAGACTACTTTGCTCTCATGGTTGCCAACATGTTGGTTGGGAGTTGGGACAGATCCTTCAGTGCTGGTCGAAATGTTGGAAGTAAATTAGCACAGCAAGTTTGCCAGCACAATCTTGCTCACAACTTCATGTCATTTAACACATGTTACACAGATACAGGCTTATGGGGCATCTATTTTGTAGCTGATAAAATGCAATTGGACAACATGGTGTTCTGTGTACAAAAAGAGTGGATGAGAATATGTACCAGTGTGACAGAACATGAAGTTTCAAGAGCCAAAAATTTGTTGAAAACTAATATTCTTATGCAGTTGGATGGTTCTACACCTATCTGTGAAGATATTGGAAGACAAATGTTGACTTATGGCCGCCGTATTCCCCTGCCAGAACTAGATATGAGAATCGAGATGATTGATGCCAAGACAGTTAAGGAAGTTGCTACAAAGTACATATATGATCGCTGCCCTGCTGTTGTTGGTGTTGGTCCTGTAGAGCAGTTGCCTGATTATAATCGTCTCAGAGGTGGCATATACATTTTCTATTTAGGAATGGCAGCTATACGTAAAAAGCTGGTAATTGTAGGTGATGGTGCCTGTGGCAAAACCTGTCTCTTAATCGTATTTTCCAAAGATCAATTTCCAGAAGTATATGTACCTACTGTGTTTGAAAATTATGTTGCTGACATAGAAGTCGACAACAAGCAAGTTGAGCTGGCATTGTGGGATACGGCAGGACAGGAGGATTATGACCGGCTACGTCCTCTATCATACCCCGACACCGATGTCATACTTATGTGCTTTTCAGTTGATAGTCCAGACAGTTTAGAGAACATCCCTGAGAAATGGACGCCAGAGGTCAAGCATTTCTGCCCAAATGTCCCAATAATTCTGGTTGGAAACAAGAAGGATTTGAGAAATGACGACAATACCAAGAGAGAATTAGCTAAGATGAAACAAGAACCCGTAAAGTCAGAAGAAGGTAGAGCTATGTCTGAAAAGATTGGAGCTTTTGCGTATATGGAATGTTCAGCTAAGACCAAAGAAGGTGTTCGAGATGTATTTGAAACTGCGACAAAGGCAGCCTTACAAACCAAAAAAAAGAAGAGAGGAAAGTGTGTTCTTGTtctcctcgtcactcaactgtcactgattgtcatgacatcagagaaattatattgtattgaagaagatgtccttgttttattcgacgttcgaaccATTATGAGGGAAATAATGAATGATCCACTGTATGCATCGATACTCCATCCCGTCCAGCAGAGTATGGAGCCTGAAGTAACTCCTGAACAATTGCAATCAGTTGATAGTCAAACTGATCCTAATACAAAACTGGAAGCTGGAGCAACCAGTACACcttctgctagtacttctgctagtacATGTACTCATGTCAAAGTAGAAACTAACAAGACAAGTGTAACTCCTTGTGCCGAGCCTATCAGTAATACACGCGAAGCATCCAGCCAAACTACCAGTTGTCTTAGTTGCTACAATCTTAGAAATGAGAATCTTCAACAAAAAAACAGAATATTAACCCTTAGAGAGATATTAAAACGCAAGAATGGTACCATCAGAAAATTAAAATATCgtcgtaggcttgagtgcttttaccaagtcttttttgaaatggctgtatacTACGGTGGCGGCCTCCTTGGCCATTACCCTACGAGCAGAAAGGAGACTCTGCTCATAGGTATTCCACATAATAACAAGGAGAATTTAGCTTTTGGTCACAATCAATCTCAAGCAAATTTGCACTGA

Transcript

alvinactis_v1_g30755

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan
PF00675	Peptidase_M16	Insulinase (Peptidase family M16)	Family	Interproscan
PF05193	Peptidase_M16_C	Peptidase M16 inactive domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001431	Binding_site	Peptidase M16, zinc-binding site	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR007863	Domain	Peptidase M16, C-terminal	Interproscan
IPR011249	Homologous_superfamily	Metalloenzyme, LuxS/M16 peptidase-like	Interproscan
IPR011765	Domain	Peptidase M16, N-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050361	Family	Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase Complex	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11851	METALLOPROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0006627	Biological Process	protein processing involved in protein targeting to mitochondrion	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-