| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| alvinactis_v1_g3074 | TRANS-GOLGI NETWORK INTEGRAL MEMBRANE PROTEIN TGN38 | chr_2 | 4420406 | 4442564 | + |
| CDS | |||||
| alvinactis_v1_g3074 | |||||
| Transcript |
| alvinactis_v1_g3074 |
| Protein |
| alvinactis_v1_g3074 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF00567 | TUDOR | Tudor domain | Domain | Interproscan |
| PF12872 | OST-HTH | OST-HTH/LOTUS domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR002999 | Domain | Tudor domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR025605 | Domain | OST-HTH/LOTUS domain | Interproscan |
| IPR035437 | Homologous_superfamily | SNase-like, OB-fold superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR041966 | Homologous_superfamily | LOTUS-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23211 | TRANS-GOLGI NETWORK INTEGRAL MEMBRANE PROTEIN TGN38 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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