Detailed information of alvinactis_v1_g2890 in Alvinactis idsseensis sp. Nov. Gene info
Gene IDAnnotationChromosomeStartEndStrand
alvinactis_v1_g2890RIBONUCLEASEchr_218647841912353+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00773RNBRNB domainDomainInterproscan
PF13460NAD_binding_10NAD(P)H-binding DomainInterproscan
PF17216Rrp44_CSD1Rrp44-like cold shock domainDomainInterproscan
PF17849OB_Dis3Dis3-like cold-shock domain 2 (CSD2)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001900DomainRibonuclease II/RInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR016040DomainNAD(P)-binding domainInterproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR033771DomainRrp44-like cold shock domainInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR041505DomainDis3-like cold-shock domain 2Interproscan
IPR050180FamilyRNR RibonucleaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23355RIBONUCLEASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP