Gene detail

Detailed information of alvinactis_v1_g28887 in Alvinactis idsseensis sp. Nov. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
alvinactis_v1_g28887	POLY [ADP-RIBOSE] POLYMERASE	chr_15	17329762	17342171	-

Gene Structure

More details in Jbrowse Sequence

CDS

alvinactis_v1_g28887

ATGGCTACCAAACACAGCAGAGAGCACCTGAATCCGCTAAAAAAGAAGTTTGTAAGTCCAAATGGGAATCGCAAATCAGCAAAATTTCCAAGTGTTTCTCCAAAGTTCAAGACCAATTTGAAAGAATTCCAAAAATTTTCTCAGCATAGCAAAAAGGATGCAAGTTTGAAAAAGAAACTTTATGAAATGAAGAAAAATAAGCGTGAGAGGTATCATTTAGGTGGCAACAGGTCGGACCCCCTGAATTTGAACAGCTTGATCGATCGTGATCCAATGCTTAGTACCCCTCAGGCGTCACCACACCCAATTCATGGGGACTCGCCTGTTGAGATATACCGTCCTCACCACGATAATGATCCACTCAATCTGAAATGCTACCCTGGTGAGGATCTGAAAGACGGGCAGACACCTaaaaagaagaagaaaaagaagcctaagagtaaccaaaatgacatcgaaaacaaaggagaaaaaaatcaaaataaggaggctgaaaaagtggaaccgatgaaagataagaaaaagaagaaaaagaacaagaaaGCAAAGAGCAGTGCAGGAGCCACACAAGAGCAAAGTATTGACGACATATCTGTGAAGGTTGAAGAGAGTGACAACGGAGGAGATGTGGCCCAAGGTGAAGATAATGCTGAACGAGAAAACGAGGAAAAAAGTGAAACTTCTGTAAGTGACGACGGTGAACCACCACAAAAGAAAGTACGGAAAAGTAGTGACAGCTCGCTGGAAGAGACCGGTAGTGATAGTGTACCAAAGGGCAACGTAGAACATAAGAGTGAAGAAGTTGTGGCAAAACAAATCGATGAACAAAAATCTGAAACCCAAGAACCTTCTTTTAGTAAACCACAACCAAATTCCAGACAAAAGAAACACGACAAGAAAAAGTCAAACAAGACTTTTATCTATGGGAATTATAATAGATATTATAACTACCGCAATCCTCAATACACAGAAGATTTAAGACTGAAGAGCTTCAGTAAAGACTGGTTTCATGGAAAAGACATTCTCGATATTGGATGTAACATAGGTGATATAACCATTGCCATAGCAAAACAGTTTGAACCTAGGATCATCATTGGCAACGATATTGACAATGCTCTTATAAAGATAGCAAAAAGCAAGTGCCAATCATTTGCTTGGAGTTCTACGGCTGTATCTAGTAATGCAGGGATGAATTTTCCCATGTCTTTTGCTGTAACAAATGGGCCATTAGCTGCGCCGCTGCTGCTTCAAAATGAGGAAAACTTGAAATTCCCTAAAAATATCATATTCAAACAGGAAAACTATGTGCCAACAGACGAGAAGTCACTAGGCAAACAGAGGCCGATGTTCGATACCATCCTGTGTCTGAGCGTGACCAAGTGGGTTCACTTAAACTGGGGAGACCAAGGGCTTAGACTGATGTTCAAGAAGATATACAAACACCTGAGACCTGGTGGAAGGCTAATCCTTGAGCCTCAGCCTTTCGCTTCATATAAGAAGAAAAGAAAGTTATCTGAAAAGATCAGAGCCAACTATGAAAAGATCAGCTTCAAACCTGAGCAGTTCATAGACTATTTACTGTCAGATGAGGTTGGGTTTGTGGCTTATGAAGTCTTGGAGGAGCCCCAGCATGGTGCACCAGTAAGTAAGTTTCAGACGCCCGATATATCTCCTCACCAAAAGCCATCACTAAGACAGCCAAAATCTGAAAACTACATGGCTCCCAGTGATAACAGTGTCCTTCAGGATACTGAAGGGATTACCCTGGGATTAAATAAAGGTTATTACATTACATATttgaagggttccgtgcaagaatcatATCAGAGGATCTCTCTACAGTTAATTGAAGAAGAGGAAGCTTTTCAACTTCATAATTCTGAAATGGCAAAATCAAACCTGAGAGAGCGTGCTGGAATGGAACTCTTTTCGATTGTCTGTAGTCAAGGTGGAATCATGGAGCTAGTCAGTGCTGTTTCGCGTCTTACCACTCAAAATAAGAAGGAAATCATGCGTTCTGGTGAAGCTAAATTTATAGAGAAATACTTCCCCAAGATCCTCAAAGTTGTAAGATCTCAATCCTGGACAGAAGTCGAAGCAATAATGCCCTTCAGTTTTTGTCAGGAAGCAGCAAAGGGAACGTGTCCTCTCGGAGGACGTTGTACCAAGCTTCATTTGTGTCCTTATTATTTGAAAGGAACTTGTACATACAAGACAAAGTGTCGTCGCTCGCATGATAAGAAAGACCAGCATACAATGTCTCTACTGAATGCCCTCCAGCTTGGAGAGATCGACGATGACATCTGGGACATGCTTTTGAAGAGGGTTCTGGCAGACACGGAAATGGAAAGAGGCGCTGCAAGCCATGACGTCCCTGATGTCTGTAAGCATTACAATAACCAAGGCGGTTGCAGCAAAGCCGAGAAATGCCCATTCCTACACGTATGCAGACACTTCGTGGATGGCGACTGCAAGTTTGGAGATGGCTGTAAGAGAGATCATAATCTTACAGAGGATCCACATAATTATGAAATCTTGAAAAAATTTCAATTGATAAACCTTTCCATCCAGCAGTGCTTGACCCTGTTAAGAGGCAGAGAAAGGAATAGGACGTCAAGTTCAAGCTCAGACTCTTCACTTCTGCAGGATGGAGCACCACGCCATAGCAAAGAGATGAAGCCAAGTGTACCTGCAGCACCAAGTGTTCCCATCCGAGCACCAACTAACACAGACAGCCGGAAAAATGTAGAAATATGTGGGTTTCATTTGAAGGAAAAATGCAACTATGGTCAAAAGTGCCTCAACTTACATAGAGAACTGCCCTATCAGTGGCAATTCAGTCAAGAAATTGGACCAAATCCAAGTAATTCCAACTGGTTAGACTTCCCGGGGGATTCAAACATAATGGCTGAACATGCATTTTGCAACTTAGATTCCACACTTATCAATTTTTACATCAAAGAACAGGCTTACCAAATAAGCTTTGGTGAGATGGTTGCTCATCCTTTGATGGGGCAGCCTGGACTTAAGCTTCAGCGGGTCACAACACAGTCATCTGAAGAAGCCCCTCCTGGTCACATATTCAGTACCCATTGGATTTGGTACTGGAAAGACGAGAATGGTGATTGGCAATCCTATGACTCACCAGGAAGTGGAGTTGAACCGAGTACAACTTGTAGCAAGTCTTTAGAAAAGGATTTCCTGCAAGGCAAAGAAAGCCACAGTATTAGTGCTGGGAAACACCAATATATTCTTTACTACAAGGACAAGAATATGTTTCAAAGAAATATCAAGTTTCTAACTGAGAGGGCAGTAATCAGAAGACCTGAGTTTGTCGCAAAAGACAAAATGAAAGAAATTGCACAGAGACGAATAGAAACCCTAAAAGAAGCATTCAAGTCCCAAAGCACTTCATTGAGTCCCATGAGCAGCACTAGTTTACCCTCGCACTGGTCTCCCATGCAGGACAGAGATTTCTGTCTTGAAAGCCTGTCTGTGACATCGCAAGAGTATAAAACAGCTGACGAAAAGTTCCAAAGCACCATGGTATCATCAAAGGCTGTAATTAAAATTGAAAGGATACAGAATCCTGACTTGTGGATCGCATTTACTCAGAAAAAGGCAAGAATGCAGTCCAAGGCATCAAACACTCTTCCAGAAGAACGACCACAATTGTTCCATGGAACCAATCTTGACGTCCGCGAAGCAATATGTCAGCAGGGTTTCGATTGGCGCATGTGCGGAAAGCATGGCACATTGTACGGAAAGGGAAGCTACTTCGCGTGTAACGCAGGCTATTCCCATCGTTACACCGATCACTATGATGGTGGACACCGCTACATGTTCATTGCAAGAGTACTGGTCGGGTCATACGCTGTAGGGGAGAAGTCGAGGACTAGACCACCCCCCAAAGATCGGAGCAAACCTTATGGCGACTTGTACGACTCTTGCGTCAACGACGAAGTCAATCCAAGTATATTTGTAGTGTTTGATAACAATCAGGCGTATCCTGAGTATCTTATCACTTACAGATAA

Transcript

alvinactis_v1_g28887

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00644	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan
PF02825	WWE	WWE domain	Family	Interproscan
PF06859	Bin3	Bicoid-interacting protein 3 (Bin3)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR004170	Domain	WWE domain	Interproscan
IPR010675	Domain	RNA methyltransferase bin3, C-terminal	Interproscan
IPR012317	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan
IPR024160	Domain	Bin3-type S-adenosyl-L-methionine binding domain	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR037197	Homologous_superfamily	WWE domain superfamily	Interproscan
IPR051712	Family	Mono-ADP-ribosyltransferase and antiviral protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45740	POLY [ADP-RIBOSE] POLYMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0140289	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-